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CG1172 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40647, updated on 4-Jan-2025

Summary

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Official Symbol
CG1172provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0264712
Locus tag
Dmel_CG1172
See related
AllianceGenome:FB:FBgn0264712
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CC1172; CR43473; Dmel\CG1172
Old locus tag
Dmel_CR43473
Summary
Is expressed in adult head and organism. Orthologous to human UBTD1 (ubiquitin domain containing 1) and UBTD2 (ubiquitin domain containing 2). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See CG1172 in Genome Data Viewer
Location:
83A1-83A1; 3-47.5 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (5393922..5399510)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (1219644..1225232)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene krotzkopf verkehrt Neighboring gene transfer RNA:Arginine-TCG 4-1 Neighboring gene uncharacterized protein Neighboring gene Odorant receptor 83a Neighboring gene uncharacterized protein Neighboring gene Odorant receptor co-receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide analysis of mRNAs regulated by Drosha and Argonaute proteins in Drosophila melanogaster. Rehwinkel J, et al. Mol Cell Biol, 2006 Apr. PMID 16581772, Free PMC Article
  2. Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster. Dunn JG, et al. Elife, 2013 Dec 3. PMID 24302569, Free PMC Article
  3. Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions. Erives AJ. Dev Genes Evol, 2015 Sep. PMID 26173873, Free PMC Article
  4. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
  5. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article

See all (24) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG1172-PA
CG1172-PB
CG1172-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    5393922..5399510
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001275351.2 → NP_001262280.1  uncharacterized protein Dmel_CG1172, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262280.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VNB2
    Conserved Domains (3) summary
    cd01794
    Location:164 → 233
    DC_UbP_C; dendritic cell derived ubiquitin-like protein
    smart00213
    Location:161 → 232
    UBQ; Ubiquitin homologues
    pfam16455
    Location:37 → 141
    UBD; Ubiquitin-binding domain

  2. NM_001260002.2 → NP_001246931.1  uncharacterized protein Dmel_CG1172, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001246931.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VNB2
    Conserved Domains (3) summary
    cd01794
    Location:164 → 233
    DC_UbP_C; dendritic cell derived ubiquitin-like protein
    smart00213
    Location:161 → 232
    UBQ; Ubiquitin homologues
    pfam16455
    Location:37 → 141
    UBD; Ubiquitin-binding domain

  3. NM_141277.5 → NP_649534.1  uncharacterized protein Dmel_CG1172, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649534.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VNB2
    Related
    FBpp0078436
    Conserved Domains (3) summary
    cd01794
    Location:164 → 233
    DC_UbP_C; dendritic cell derived ubiquitin-like protein
    smart00213
    Location:161 → 232
    UBQ; Ubiquitin homologues
    pfam16455
    Location:37 → 141
    UBD; Ubiquitin-binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VNB2 Q9VNB2

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