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Obp83ef Odorant-binding protein 83ef [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40747, updated on 4-Jan-2025

Summary

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Official Symbol
Obp83efprovided by FlyBase
Official Full Name
Odorant-binding protein 83efprovided by FlyBase
Primary source
FLYBASE:FBgn0046876
Locus tag
Dmel_CG31557
See related
AllianceGenome:FB:FBgn0046876
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
83f; 83f-1; 83f-2; CG15583; CG31557; DmelObp83ef; Dmel\CG31557; Obp83e; OBP83e; Obp83f
Summary
Predicted to enable odorant binding activity. Predicted to be involved in sensory perception of smell. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

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See Obp83ef in Genome Data Viewer
Location:
83D4-83D4; 3-47.5 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (6109642..6111034, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (1935364..1936756, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene gasp Neighboring gene long non-coding RNA:CR44929 Neighboring gene Odorant-binding protein 83cd Neighboring gene Odorant-binding protein 83g Neighboring gene Vacuolar H[+] ATPase 14kD subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Stochastic Modeling of Gene Expression Evolution Uncovers Tissue- and Sex-Specific Properties of Expression Evolution in the Drosophila Genus. Pal S, et al. J Comput Biol, 2023 Jan. PMID 36037023, Free PMC Article
  2. "Plus-C" odorant-binding protein genes in two Drosophila species and the malaria mosquito Anopheles gambiae. Zhou JJ, et al. Gene, 2004 Feb 18. PMID 14960367
  3. A large family of divergent Drosophila odorant-binding proteins expressed in gustatory and olfactory sensilla. Galindo K, et al. Genetics, 2001 Nov. PMID 11729153, Free PMC Article
  4. The odorant-binding proteins of Drosophila melanogaster: annotation and characterization of a divergent gene family. Graham LA, et al. Gene, 2002 Jun 12. PMID 12119098
  5. Evolution of gene expression in the Drosophila olfactory system. Kopp A, et al. Mol Biol Evol, 2008 Jun. PMID 18296696, Free PMC Article

See all (43) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables odorant binding IEA
Inferred from Electronic Annotation
more info
  
enables odorant binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in sensory perception of chemical stimulus ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
involved_in sensory perception of smell IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
Odorant-binding protein 83ef
Names
CG31557-PA
Obp83ef-PA
Odorant-binding protein 83f
pseudogene 83e

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    6109642..6111034 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_169125.3 → NP_731042.1  Odorant-binding protein 83ef [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_731042.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0JQ37, Q9VNL2
    Related
    FBpp0078267
    Conserved Domains (1) summary
    smart00708
    Location:133 → 234
    PhBP; Insect pheromone/odorant binding protein domains
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VNL2 Q9VNL2

Gene LinkOut

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