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Ccp84Ag Ccp84Ag [ Drosophila melanogaster (fruit fly) ]

Gene ID: 40819, updated on 9-Dec-2024

Summary

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Official Symbol
Ccp84Agprovided by FlyBase
Official Full Name
Ccp84Agprovided by FlyBase
Primary source
FLYBASE:FBgn0004777
Locus tag
Dmel_CG2342
See related
AllianceGenome:FB:FBgn0004777
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:RE04513; BG:DS00004.7; cc2; Ccp; CG2342; DmelCcp84Ag; Dmel\CG2342
Summary
Predicted to be a structural constituent of chitin-based larval cuticle. Predicted to be involved in chitin-based cuticle development. Predicted to be located in chitin-based extracellular matrix. Predicted to be active in extracellular matrix. Is expressed in adult head; adult heart; embryonic foregut; and embryonic/larval tracheal section. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See Ccp84Ag in Genome Data Viewer
Location:
84A2-84A2; 3-48 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (6686728..6688039)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (2512450..2513761)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene labial Neighboring gene Ecdysone-dependent gene 84A Neighboring gene Ccp84Af Neighboring gene Ccp84Ae

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Novel Neuron-Specific Regulator of the V-ATPase in Drosophila. Dulac A, et al. eNeuro, 2021 Sep-Oct. PMID 34620624, Free PMC Article
  2. Fast sequence evolution of Hox and Hox-derived genes in the genus Drosophila. Casillas S, et al. BMC Evol Biol, 2006 Dec 12. PMID 17163987, Free PMC Article
  3. Conservation of regulatory sequences and gene expression patterns in the disintegrating Drosophila Hox gene complex. Negre B, et al. Genome Res, 2005 May. PMID 15867430, Free PMC Article
  4. Extensive gene amplification and concerted evolution within the CPR family of cuticular proteins in mosquitoes. Cornman RS, et al. Insect Biochem Mol Biol, 2008 Jun. PMID 18510978, Free PMC Article
  5. Molecular and genetic organization of the antennapedia gene complex of Drosophila melanogaster. Kaufman TC, et al. Adv Genet, 1990. PMID 1971986

See all (36) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural constituent of chitin-based larval cuticle ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in chitin-based cuticle development ISM
Inferred from Sequence Model
more info
 PubMed 
Component Evidence Code Pubs
located_in chitin-based extracellular matrix ISM
Inferred from Sequence Model
more info
 PubMed 
is_active_in extracellular matrix IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Ccp84Ag
Names
CG2342-PA
Ccp84Ag-PA
cuticle cluster 2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    6686728..6688039
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_141420.3 → NP_649677.1  Ccp84Ag [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649677.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O97064, Q8MRD2
    Related
    FBpp0081187
    Conserved Domains (1) summary
    pfam00379
    Location:42 → 94
    Chitin_bind_4; Insect cuticle protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O97064 O97064
Q8MRD2 Q8MRD2

Gene LinkOut

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