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Unc50 Unc50 RNA binding protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41029, updated on 9-Dec-2024

Summary

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Official Symbol
Unc50provided by FlyBase
Official Full Name
Unc50 RNA binding proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0037609
Locus tag
Dmel_CG9773
See related
AllianceGenome:FB:FBgn0037609
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG9773; Dmel\CG9773; DmUNC-50
Summary
Predicted to be involved in vesicle-mediated transport. Predicted to be active in Golgi membrane. Is expressed in organism. Orthologous to human UNC50 (unc-50 inner nuclear membrane RNA binding protein). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See Unc50 in Genome Data Viewer
Location:
85A5-85A5; 3-48 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (8675283..8676613, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (4501005..4502335, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene pink Neighboring gene transfer RNA:Tyrosine-GTA 1-8 Neighboring gene uncharacterized protein Neighboring gene mitochondrial ribosomal protein L19 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cofactor-enabled functional expression of fruit fly, honeybee, and bumblebee nicotinic receptors reveals picomolar neonicotinoid actions. Ihara M, et al. Proc Natl Acad Sci U S A, 2020 Jul 14. PMID 32611810, Free PMC Article
  2. Functional impact of subunit composition and compensation on Drosophila melanogaster nicotinic receptors-targets of neonicotinoids. Komori Y, et al. PLoS Genet, 2023 Feb. PMID 36795653, Free PMC Article
  3. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article
  4. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
  5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in vesicle-mediated transport ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in Golgi membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in Golgi membrane ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
Unc50 RNA binding protein
Names
CG9773-PA
Unc50-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    8675283..8676613 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_141556.5 → NP_649813.1  Unc50 RNA binding protein [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649813.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VHN5
    Related
    FBpp0081434
    Conserved Domains (1) summary
    pfam05216
    Location:49 → 269
    UNC-50; UNC-50 family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VHN5.1 Q9VHN5

Gene LinkOut

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