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CG8420 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41097, updated on 9-Dec-2024

Summary

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Official Symbol
CG8420provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0037664
Locus tag
Dmel_CG8420
See related
AllianceGenome:FB:FBgn0037664
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO0140519.182; Dmel\CG8420
Summary
Involved in sexual reproduction. Predicted to be located in extracellular space. Is expressed in adult head and embryonic/larval tracheal section. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG8420 in Genome Data Viewer
Location:
85D2-85D4; 3-48 cM
Exon count:
7
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (9246649..9251431)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5072371..5077153)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene D1 chromosomal protein Neighboring gene Vacuolar protein sorting 15 Neighboring gene Sulfotransferase 2 Neighboring gene pseudo

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Deep sequencing of the prothoracic gland transcriptome reveals new players in insect ecdysteroidogenesis. Nakaoka T, et al. PLoS One, 2017. PMID 28257485, Free PMC Article
  2. The conserved microRNA miR-8 tunes atrophin levels to prevent neurodegeneration in Drosophila. Karres JS, et al. Cell, 2007 Oct 5. PMID 17923093
  3. Evolutionary rate covariation identifies new members of a protein network required for Drosophila melanogaster female post-mating responses. Findlay GD, et al. PLoS Genet, 2014 Jan. PMID 24453993, Free PMC Article
  4. E(var)3-9 of Drosophila melanogaster encodes a zinc finger protein. Weiler KS. Genetics, 2007 Sep. PMID 17660546, Free PMC Article
  5. A Genome-Wide Screen for Dendritically Localized RNAs Identifies Genes Required for Dendrite Morphogenesis. Misra M, et al. G3 (Bethesda), 2016 Aug 9. PMID 27260999, Free PMC Article

See all (36) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in sexual reproduction IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
Names
CG8420-PA
CG8420-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    9246649..9251431
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001275477.1 → NP_001262406.1  uncharacterized protein Dmel_CG8420, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262406.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4KGJ8

  2. NM_141612.3 → NP_649869.1  uncharacterized protein Dmel_CG8420, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_649869.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VHH1
    Related
    FBpp0081453
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4KGJ8 A0A0B4KGJ8
Q9VHH1 Q9VHH1

Gene LinkOut

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