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Or85f Odorant receptor 85f [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41119, updated on 9-Dec-2024

Summary

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Official Symbol
Or85fprovided by FlyBase
Official Full Name
Odorant receptor 85fprovided by FlyBase
Primary source
FLYBASE:FBgn0037685
Locus tag
Dmel_CG16755
See related
AllianceGenome:FB:FBgn0037685
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
85D.1; 85f; CG16755; Dmel\CG16755; DmOr85f; DOR32; OR85f
Summary
Enables ionotropic olfactory receptor activity. Involved in detection of chemical stimulus involved in sensory perception of smell. Located in plasma membrane. Is expressed in adult olfactory receptor neuron Or49a/85f and antennal lobe glomerulus DL4. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

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See Or85f in Genome Data Viewer
Location:
85D15-85D15; 3-48 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (9398190..9399551)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5223912..5225273)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Serine racemase Neighboring gene FER tyrosine kinase Neighboring gene antisense RNA:CR46145 Neighboring gene uncharacterized protein Neighboring gene Ribosomal protein L34b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Drosophila Avoids Parasitoids by Sensing Their Semiochemicals via a Dedicated Olfactory Circuit. Ebrahim SA, et al. PLoS Biol, 2015 Dec. PMID 26674493, Free PMC Article
  2. "Super e-noses": Multi-layer perceptron classification of volatile odorants from the firing rates of cross-species olfactory receptor arrays. Bachtiar LR, et al. Annu Int Conf IEEE Eng Med Biol Soc, 2014. PMID 25570118
  3. Odorant receptor polymorphisms and natural variation in olfactory behavior in Drosophila melanogaster. Rollmann SM, et al. Genetics, 2010 Oct. PMID 20628035, Free PMC Article
  4. Neuropeptide F signaling regulates parasitoid-specific germline development and egg-laying in Drosophila. Sadanandappa MK, et al. PLoS Genet, 2021 Mar. PMID 33770070, Free PMC Article
  5. Exitron splicing of odor receptor genes in Drosophila. Shang X, et al. Proc Natl Acad Sci U S A, 2024 Mar 26. PMID 38507450, Free PMC Article

See all (65) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables ionotropic olfactory receptor activity HDA PubMed 
enables odorant binding IEA
Inferred from Electronic Annotation
more info
  
enables odorant binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in detection of chemical stimulus involved in sensory perception of smell HDA PubMed 
involved_in detection of chemical stimulus involved in sensory perception of smell IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in dendrite membrane ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane HDA PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
odorant receptor 85f
Names
CG16755-PA
Or85f-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    9398190..9399551
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079565.3 → NP_524289.1  odorant receptor 85f [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524289.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VHE6
    UniProtKB/TrEMBL
    E2E4W1, E2E4X4, E2E4X6, E2E4Y0, E2E4Z5, E2E502
    Related
    FBpp0081506, FBtr0082028
    Conserved Domains (1) summary
    pfam02949
    Location:68 → 381
    7tm_6; 7tm Odorant receptor
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VHE6.1 Q9VHE6

Gene LinkOut

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