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Rlb1 Rlb1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41139, updated on 4-Jan-2025

Summary

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Official Symbol
Rlb1provided by FlyBase
Official Full Name
Rlb1provided by FlyBase
Primary source
FLYBASE:FBgn0014022
Locus tag
Dmel_CG8161
See related
AllianceGenome:FB:FBgn0014022
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG8161; Dmel\CG8161; Ov30; Rlb
Summary
Predicted to be involved in maturation of SSU-rRNA. Located in membrane and nucleus. Is expressed in embryonic/larval midgut and organism. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
all
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Genomic context

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See Rlb1 in Genome Data Viewer
Location:
85D19-85D19; 3-48 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (9513327..9514827)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5339049..5340549)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene rumpelstiltskin Neighboring gene Ras oncogene at 85D Neighboring gene mitochondrial ribosomal protein L47 Neighboring gene uncharacterized protein Neighboring gene mir-2283 stem loop Neighboring gene Lysine demethylase 3 Neighboring gene blistery

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression during embryogenesis of three genes clustered in the Ras1 region of Drosophila melanogaster. Ezer ST, et al. Dev Dyn, 1994 Oct. PMID 7873789
  2. Differential activity of Ras1 during patterning of the Drosophila dorsoventral axis. Schnorr JD, et al. Genetics, 1996 Dec. PMID 8978043, Free PMC Article
  3. Ras controls growth, survival and differentiation in the Drosophila eye by different thresholds of MAP kinase activity. Halfar K, et al. Development, 2001 May. PMID 11290305
  4. Ras promotes cell survival by antagonizing both JNK and Hid signals in the Drosophila eye. Wu Y, et al. BMC Dev Biol, 2009 Oct 20. PMID 19840402, Free PMC Article
  5. Ras1 interacts with multiple new signaling and cytoskeletal loci in Drosophila eggshell patterning and morphogenesis. Schnorr JD, et al. Genetics, 2001 Oct. PMID 11606538, Free PMC Article

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of 90S preribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Rlb1
Names
CG8161-PA
Rlb1-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    9513327..9514827
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_057751.4 → NP_477099.1  Rlb1 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_477099.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q27411, Q3YMU8
    Related
    FBpp0081540
    Conserved Domains (2) summary
    PTZ00108
    Location:3 → 345
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    pfam09073
    Location:389 → 461
    BUD22; BUD22
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q27411 Q27411
Q3YMU8 Q3YMU8
Q95S53 Q95S53

Gene LinkOut

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