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CG12594 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41416, updated on 18-Sep-2024

Summary

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Official Symbol
CG12594provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0037941
Locus tag
Dmel_CG12594
See related
AllianceGenome:FB:FBgn0037941
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG12594
Orthologs
all
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Genomic context

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See CG12594 in Genome Data Viewer
Location:
86E16-86E17; 3-51 cM
Exon count:
8
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (11721734..11732479)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (7547456..7558201)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene inhibitor-t Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Bloom syndrome helicase Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Landscape of the DNA Transposons in the Genome of the Horezu_LaPeri Strain of Drosophila melanogaster. Bologa AM, et al. Insects, 2023 May 25. PMID 37367310, Free PMC Article
  2. The genetic basis for variation in olfactory behavior in Drosophila melanogaster. Arya GH, et al. Chem Senses, 2015 May. PMID 25687947, Free PMC Article
  3. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
  4. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
  5. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG12594-PA
CG12594-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    11721734..11732479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001275553.1 → NP_001262482.1  uncharacterized protein Dmel_CG12594, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262482.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4V500, Q9VGJ0
    Conserved Domains (2) summary
    smart00209
    Location:239 → 271
    TSP1; Thrombospondin type 1 repeats
    cl22861
    Location:535 → 655
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

  2. NM_141852.3 → NP_650109.1  uncharacterized protein Dmel_CG12594, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650109.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4V500, Q9VGJ0
    Related
    FBpp0081905
    Conserved Domains (2) summary
    smart00209
    Location:239 → 271
    TSP1; Thrombospondin type 1 repeats
    cl22861
    Location:535 → 655
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VGJ0 Q9VGJ0

Gene LinkOut

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