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PPIF peptidylprolyl isomerase F [ Bos taurus (domestic cattle) ]

Gene ID: 414346, updated on 27-Dec-2024

Summary

Official Symbol
PPIFprovided by VGNC
Official Full Name
peptidylprolyl isomerase Fprovided by VGNC
Primary source
VGNC:VGNC:33198
See related
BGD:BT18073; Ensembl:ENSBTAG00000016711
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
CypD; CyP-D
Annotation information
Note: This gene encodes a 179 aa mature peptide that is found in the mitochondrion. It has been labeled 'cyclophilin D'. This same name has also been applied to a different cytoplasmic protein of 370 aa, which is represented by GeneID 281420, PPID. [12 Mar 2012]
Orthologs
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Genomic context

See PPIF in Genome Data Viewer
Location:
chromosome: 28
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 28 NC_037355.1 (34966705..34973641)

Chromosome 28 - NC_037355.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132344145 Neighboring gene zinc finger MIZ-type containing 1 Neighboring gene zinc finger CCHC-type containing 24 Neighboring gene RNA-binding protein 3-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037355.1 Chromosome 28 Reference ARS-UCD2.0 Primary Assembly

Expression

  • Project title: Dominette sequence data
  • BioProject: PRJNA294306
  • Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in mitochondrion PubMed 

General protein information

Preferred Names
peptidyl-prolyl cis-trans isomerase F, mitochondrial
Names
PPIase F
cyclophilin D
cyclophilin F
peptidyl-prolyl cis-trans isomerase, mitochondrial
rotamase F
NP_001001597.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001597.2 → NP_001001597.2  peptidyl-prolyl cis-trans isomerase F, mitochondrial precursor

    Status: VALIDATED

    Source sequence(s)
    NKLS02000028
    Related
    ENSBTAP00000022213.2, ENSBTAT00000022213.3

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037355.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    34966705..34973641
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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