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CG31211 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41443, updated on 9-Dec-2024

Summary

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Official Symbol
CG31211provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0051211
Locus tag
Dmel_CG31211
See related
AllianceGenome:FB:FBgn0051211
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO03070958.3; cDNA; CG14732; CG18546; Dmel\CG31211
Summary
Predicted to be active in nuclear speck and presynaptic active zone. Orthologous to human PNISR (PNN interacting serine and arginine rich protein). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG31211 in Genome Data Viewer
Location:
87A2-87A2; 3-51 cM
Exon count:
9
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (11949680..11954038)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (7775402..7779760)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Cadherin 87A Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Heat shock protein 70 Aa Neighboring gene Heat shock protein 70 Ab Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Are scs and scs' 'neutral' chromatin domain boundaries of the locus? Avramova Z, et al. Trends Genet, 1999 Apr. PMID 10203820
  2. New properties of Drosophila scs and scs' insulators. Kyrchanova O, et al. PLoS One, 2013. PMID 23638134, Free PMC Article
  3. Studies of the role of the Drosophila scs and scs' insulators in defining boundaries of a chromosome puff. Kuhn EJ, et al. Mol Cell Biol, 2004 Feb. PMID 14749365, Free PMC Article
  4. Remarkable site specificity of local transposition into the Hsp70 promoter of Drosophila melanogaster. Shilova VY, et al. Genetics, 2006 Jun. PMID 16582443, Free PMC Article
  5. Hsp70 duplication in the Drosophila melanogaster species group: how and when did two become five? Bettencourt BR, et al. Mol Biol Evol, 2001 Jul. PMID 11420366

See all (40) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
is_active_in nuclear speck IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in presynaptic active zone IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG31211-PA
CG31211-PB
CG31211-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    11949680..11954038
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_176464.2 → NP_788641.1  uncharacterized protein Dmel_CG31211, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_788641.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q86B99
    Related
    FBpp0081954
    Conserved Domains (1) summary
    pfam15996
    Location:290 → 493
    PNISR; Arginine/serine-rich protein PNISR

  2. NM_141874.3 → NP_650131.1  uncharacterized protein Dmel_CG31211, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650131.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q960U0, Q9VGG3
    Related
    FBpp0081953
    Conserved Domains (1) summary
    pfam15996
    Location:290 → 493
    PNISR; Arginine/serine-rich protein PNISR

  3. NM_176465.2 → NP_788642.1  uncharacterized protein Dmel_CG31211, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_788642.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q86B98
    Related
    FBpp0081955
    Conserved Domains (1) summary
    pfam15996
    Location:290 → 488
    PNISR; Arginine/serine-rich protein PNISR
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q86B98 Q86B98
Q86B99 Q86B99
Q9VGG3 Q9VGG3

Gene LinkOut

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