rcbtb1.S regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: rcbtb1.S
Official Full Name: regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 S homeolog
Primary source: Xenbase:XB-GENE-987321
Locus tag: XELAEV_18016113mg
See related: EnsemblRapid:ENSXLAG00005031026 AllianceGenome:Xenbase:XB-GENE-987321
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: rcbtb1; rcbtb1-a
Summary: Orthologous to human RCBTB1 (RCC1 and BTB domain containing protein 1). [provided by Alliance of Genome Resources, Jan 2025]
Annotation information: Annotation category: partial on reference assembly
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Genomic context

Location:: chromosome: 2S

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2S	NC_054374.1 (140991503..141012145, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2S	NC_030727.1 (132006390..132027100, complement)

Chromosome 2S - NC_054374.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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General protein information

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Preferred Names: regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 S homeolog

Names: regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001091080.1 → NP_001084549.2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 S homeolog

Status: PROVISIONAL

Source sequence(s)

BC068656

UniProtKB/TrEMBL

A0A8J0PUU2, A0A974HX18

Related

ENSXLAP00005092973.1, ENSXLAT00005094656.1

Conserved Domains (4) summary

smart00225
Location:440 → 536

BTB; Broad-Complex, Tramtrack and Bric a brac

cd14821
Location:536 → 592

SPOP_C_like; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins

pfam00415
Location:163 → 213

RCC1; Regulator of chromosome condensation (RCC1) repeat

pfam00651
Location:429 → 533

BTB; BTB/POZ domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

140991503..141012145 complement

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GenBank, FASTA, Sequence Viewer (Graphics)