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ADAMTSL3 ADAMTS like 3 [ Gallus gallus (chicken) ]

Gene ID: 415465, updated on 17-Aug-2024

Summary

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Symbol
ADAMTSL3provided by CGNC
Full Name
ADAMTS like 3provided by CGNC
Primary source
CGNC:14232
See related
Ensembl:ENSGALG00010016874
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ADAMTSL3 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
32
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 10 NC_052541.1 (11503014..11681854)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 10 NC_052582.1 (11376564..11555495)

Chromosome 10 - NC_052541.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054195 Neighboring gene SH3 domain containing GRB2 like 3, endophilin A3 Neighboring gene lamin A/C like Neighboring gene stabilizer of axonemal microtubules 2 Neighboring gene elongation factor like GTPase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADAMTS-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052541.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    11503014..11681854
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004943830.5 → XP_004943887.2  ADAMTS-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YYH4, A0A8V0YYH9
    Related
    ENSGALP00010023708.1, ENSGALT00010040743.1
    Conserved Domains (4) summary
    smart00408
    Location:1318 → 1379
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:80 → 126
    TSP1; Thrombospondin type 1 repeats
    cd00096
    Location:1320 → 1329
    Ig; Ig strand B [structural motif]
    cl11960
    Location:1200 → 1285
    Ig; Immunoglobulin domain

  2. XM_004943825.5 → XP_004943882.2  ADAMTS-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YYH4, A0A8V0YYH9
    Conserved Domains (4) summary
    smart00408
    Location:1318 → 1379
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:80 → 126
    TSP1; Thrombospondin type 1 repeats
    cd00096
    Location:1320 → 1329
    Ig; Ig strand B [structural motif]
    cl11960
    Location:1200 → 1285
    Ig; Immunoglobulin domain

  3. XM_004943826.5 → XP_004943883.2  ADAMTS-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YYH4, A0A8V0YYH9
    Related
    ENSGALP00010023691.1, ENSGALT00010040726.1
    Conserved Domains (4) summary
    smart00408
    Location:1318 → 1379
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:80 → 126
    TSP1; Thrombospondin type 1 repeats
    cd00096
    Location:1320 → 1329
    Ig; Ig strand B [structural motif]
    cl11960
    Location:1200 → 1285
    Ig; Immunoglobulin domain

  4. XM_004943824.5 → XP_004943881.2  ADAMTS-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YYH4, A0A8V0YYH9
    Related
    ENSGALP00010023686.1, ENSGALT00010040721.1
    Conserved Domains (4) summary
    smart00408
    Location:1318 → 1379
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:80 → 126
    TSP1; Thrombospondin type 1 repeats
    cd00096
    Location:1320 → 1329
    Ig; Ig strand B [structural motif]
    cl11960
    Location:1200 → 1285
    Ig; Immunoglobulin domain

  5. XM_413844.8 → XP_413844.4  ADAMTS-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YYH4, A0A8V0YYH9
    Related
    ENSGALP00010023701.1, ENSGALT00010040736.1
    Conserved Domains (4) summary
    smart00408
    Location:1318 → 1379
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:80 → 126
    TSP1; Thrombospondin type 1 repeats
    cd00096
    Location:1320 → 1329
    Ig; Ig strand B [structural motif]
    cl11960
    Location:1200 → 1285
    Ig; Immunoglobulin domain

  6. XM_040706931.1 → XP_040562865.1  ADAMTS-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YYF3
    Conserved Domains (4) summary
    smart00408
    Location:1076 → 1137
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:1263 → 1319
    TSP1; Thrombospondin type 1 repeats
    cd00096
    Location:1079 → 1087
    Ig; Ig strand B [structural motif]
    cl11960
    Location:958 → 1043
    Ig; Immunoglobulin domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052582.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    11376564..11555495
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040680316.2 → XP_040536250.1  ADAMTS-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YYH9
    Conserved Domains (4) summary
    smart00408
    Location:1318 → 1379
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:80 → 126
    TSP1; Thrombospondin type 1 repeats
    cd00096
    Location:1320 → 1329
    Ig; Ig strand B [structural motif]
    cl11960
    Location:1200 → 1285
    Ig; Immunoglobulin domain

  2. XM_040680312.2 → XP_040536246.1  ADAMTS-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YYH9
    Conserved Domains (4) summary
    smart00408
    Location:1318 → 1379
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:80 → 126
    TSP1; Thrombospondin type 1 repeats
    cd00096
    Location:1320 → 1329
    Ig; Ig strand B [structural motif]
    cl11960
    Location:1200 → 1285
    Ig; Immunoglobulin domain

  3. XM_040680313.2 → XP_040536247.1  ADAMTS-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YYH9
    Conserved Domains (4) summary
    smart00408
    Location:1318 → 1379
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:80 → 126
    TSP1; Thrombospondin type 1 repeats
    cd00096
    Location:1320 → 1329
    Ig; Ig strand B [structural motif]
    cl11960
    Location:1200 → 1285
    Ig; Immunoglobulin domain

  4. XM_040680311.2 → XP_040536245.1  ADAMTS-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YYH9
    Conserved Domains (4) summary
    smart00408
    Location:1318 → 1379
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:80 → 126
    TSP1; Thrombospondin type 1 repeats
    cd00096
    Location:1320 → 1329
    Ig; Ig strand B [structural motif]
    cl11960
    Location:1200 → 1285
    Ig; Immunoglobulin domain

  5. XM_040680310.2 → XP_040536244.1  ADAMTS-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YYH9
    Conserved Domains (4) summary
    smart00408
    Location:1318 → 1379
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:80 → 126
    TSP1; Thrombospondin type 1 repeats
    cd00096
    Location:1320 → 1329
    Ig; Ig strand B [structural motif]
    cl11960
    Location:1200 → 1285
    Ig; Immunoglobulin domain

  6. XM_040680317.1 → XP_040536251.1  ADAMTS-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YYF3
    Conserved Domains (4) summary
    smart00408
    Location:1076 → 1137
    IGc2; Immunoglobulin C-2 Type
    smart00209
    Location:1263 → 1319
    TSP1; Thrombospondin type 1 repeats
    cd00096
    Location:1080 → 1084
    Ig; Ig strand B [structural motif]
    cl11960
    Location:958 → 1043
    Ig; Immunoglobulin domain
Nucleotide Protein
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