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mbo members only [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41562, updated on 9-Dec-2024

Summary

Official Symbol
mboprovided by FlyBase
Official Full Name
members onlyprovided by FlyBase
Primary source
FLYBASE:FBgn0026207
Locus tag
Dmel_CG6819
See related
AllianceGenome:FB:FBgn0026207
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
1465/07; 1465/7; anon-WO0118547.263; CG6819; Dmel\CG6819; Dnup 88; dNup88; Dnup88; DNup88; l(3)05043; l(3)S146507; Mbo; MBO; nup88; Nup88; NUP88
Summary
Enables chromatin binding activity. Involved in antimicrobial humoral response; negative regulation of protein export from nucleus; and protein import into nucleus. Located in chromatin; nuclear envelope; and nucleoplasm. Part of nuclear pore. Is expressed in adult head. Human ortholog(s) of this gene implicated in fetal akinesia deformation sequence syndrome 4. Orthologous to human NUP88 (nucleoporin 88). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
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Genomic context

See mbo in Genome Data Viewer
Location:
87C5-87C5; 3-52 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (12676487..12679052, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (8502209..8504774, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Glycine N-methyltransferase Neighboring gene uncharacterized protein Neighboring gene Cytochrome P450 313a4 Neighboring gene karmoisin

Genomic regions, transcripts, and products

Bibliography

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables chromatin binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in antimicrobial humoral response IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mRNA export from nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in negative regulation of protein export from nucleus IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein import into nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein import into nucleus IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in ribosomal large subunit export from nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in ribosomal large subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 
involved_in ribosomal small subunit export from nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in ribosomal small subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in chromatin IDA
Inferred from Direct Assay
more info
PubMed 
located_in chromatin IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in nuclear envelope IDA
Inferred from Direct Assay
more info
PubMed 
located_in nuclear lumen IDA
Inferred from Direct Assay
more info
PubMed 
part_of nuclear pore IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of nuclear pore IDA
Inferred from Direct Assay
more info
PubMed 
part_of nuclear pore ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
located_in nucleoplasm IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
members only
Names
CG6819-PA
mbo-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    12676487..12679052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079606.4NP_524330.2  members only [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524330.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9GYU8, Q9VG41
    Related
    FBpp0082137
    Conserved Domains (1) summary
    pfam10168
    Location:4701
    Nup88; Nuclear pore component