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PDPR pyruvate dehydrogenase phosphatase regulatory subunit [ Gallus gallus (chicken) ]

Gene ID: 415683, updated on 3-Dec-2024

Summary

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Symbol
PDPRprovided by CGNC
Full Name
pyruvate dehydrogenase phosphatase regulatory subunitprovided by CGNC
Primary source
CGNC:50048
See related
Ensembl:ENSGALG00010023225
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See PDPR in Genome Data Viewer
Location:
chromosome: 11
Exon count:
18
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (1801662..1822307, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (1973997..1994634, complement)

Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene fucokinase Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 2 Neighboring gene golgi glycoprotein 1 Neighboring gene ring finger and WD repeat domain 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial
XP_015134704.2
XP_040536918.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1801662..1822307 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015279218.4 → XP_015134704.2  pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial

    UniProtKB/TrEMBL
    F1NG59
    Related
    ENSGALP00010034373.1, ENSGALT00010056630.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1973997..1994634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040680984.2 → XP_040536918.2  pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial

    UniProtKB/TrEMBL
    F1NG59
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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