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CEP89 centrosomal protein 89 [ Gallus gallus (chicken) ]

Gene ID: 415769, updated on 3-Dec-2024

Summary

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Symbol
CEP89provided by CGNC
Full Name
centrosomal protein 89provided by CGNC
Primary source
CGNC:3528
See related
Ensembl:ENSGALG00010024852
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
CCDC123
Orthologs
human mouse all
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Genomic context

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See CEP89 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
20
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (9600838..9627584, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (9945151..9971869, complement)

Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene nudix hydrolase 19 Neighboring gene tudor domain containing 12 Neighboring gene solute carrier family 7 member 9 Neighboring gene Fanconi anemia core complex associated protein 24 Neighboring gene rhophilin Rho GTPase binding protein 2 Neighboring gene uncharacterized LOC121111705

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrion organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ciliary transition fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 89 kDa
Names
centrosomal protein 89kDa
coiled-coil domain containing 123

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001389555.2 → NP_001376484.1  centrosomal protein of 89 kDa

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000248
    UniProtKB/TrEMBL
    A0A8V0ZV66
    Related
    ENSGALP00010037445.1, ENSGALT00010060686.1
    Conserved Domains (2) summary
    COG1196
    Location:379 → 741
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5281
    Location:70 → 352
    COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    9600838..9627584 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040707070.2 → XP_040563004.1  centrosomal protein of 89 kDa isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZV66, A0A8V1A0C8
    Related
    ENSGALP00010037459.1, ENSGALT00010060699.1
    Conserved Domains (3) summary
    COG1196
    Location:379 → 741
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5281
    Location:70 → 352
    COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]
    TIGR04211
    Location:247 → 355
    SH3_and_anchor; SH3 domain protein

  2. XM_040707068.2 → XP_040563002.1  centrosomal protein of 89 kDa isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZV66, A0A8V1A2M3
    Related
    ENSGALP00010037451.1, ENSGALT00010060692.1
    Conserved Domains (2) summary
    COG5281
    Location:70 → 352
    COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]
    TIGR02168
    Location:398 → 709
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  3. XM_040707073.2 → XP_040563007.1  centrosomal protein of 89 kDa isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZV66
    Conserved Domains (3) summary
    COG1196
    Location:280 → 642
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5281
    Location:29 → 253
    COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]
    TIGR04211
    Location:148 → 256
    SH3_and_anchor; SH3 domain protein

  4. XM_040707074.2 → XP_040563008.1  centrosomal protein of 89 kDa isoform X5

    UniProtKB/TrEMBL
    A0A8V0ZV66
    Conserved Domains (2) summary
    COG1196
    Location:254 → 616
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR04211
    Location:122 → 230
    SH3_and_anchor; SH3 domain protein

  5. XM_040707072.2 → XP_040563006.1  centrosomal protein of 89 kDa isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZV66
    Conserved Domains (3) summary
    COG1196
    Location:280 → 642
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5281
    Location:29 → 253
    COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]
    TIGR04211
    Location:148 → 256
    SH3_and_anchor; SH3 domain protein

  6. XM_040707071.2 → XP_040563005.1  centrosomal protein of 89 kDa isoform X3

    UniProtKB/TrEMBL
    A0A8V1A4T4
    Conserved Domains (2) summary
    COG1196
    Location:237 → 606
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5281
    Location:70 → 352
    COG5281; Phage-related minor tail protein [Mobilome: prophages, transposons]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    9945151..9971869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046925534.1 → XP_046781490.1  centrosomal protein of 89 kDa isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZV66

  2. XM_046925533.1 → XP_046781489.1  centrosomal protein of 89 kDa isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZV66

  3. XM_046925538.1 → XP_046781494.1  centrosomal protein of 89 kDa isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZV66

  4. XM_046925539.1 → XP_046781495.1  centrosomal protein of 89 kDa isoform X5

    UniProtKB/TrEMBL
    A0A8V0ZV66

  5. XM_046925536.1 → XP_046781492.1  centrosomal protein of 89 kDa isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZV66

  6. XM_046925537.1 → XP_046781493.1  centrosomal protein of 89 kDa isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZV66

  7. XM_046925535.1 → XP_046781491.1  centrosomal protein of 89 kDa isoform X3

    UniProtKB/TrEMBL
    A0A8V1A4T4
Nucleotide Protein Strain
Heading Accession and Version

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