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CA5A carbonic anhydrase 5A [ Gallus gallus (chicken) ]

Gene ID: 415833, updated on 17-Aug-2024

Summary

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Symbol
CA5Aprovided by CGNC
Full Name
carbonic anhydrase 5Aprovided by CGNC
Primary source
CGNC:4371
See related
Ensembl:ENSGALG00010009365
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
CA5; CA5B
Orthologs
human mouse all
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Genomic context

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See CA5A in Genome Data Viewer
Location:
chromosome: 11
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (17637667..17653179, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (17985675..18001186, complement)

Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 7 member 5 Neighboring gene uncharacterized LOC107054327 Neighboring gene BTG3 associated nuclear protein Neighboring gene zinc finger protein 469

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbonate dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbonic anhydrase 5A, mitochondrial
Names
carbonic anhydrase 5B
carbonic anhydrase V, mitochondrial
XP_004944340.1
XP_040537351.1
XP_040537352.1
XP_414195.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    17637667..17653179 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_414195.8 → XP_414195.3  carbonic anhydrase 5A, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y5N8, A0A8V0YA50
    Related
    ENSGALP00010012847.1, ENSGALT00010022331.1
    Conserved Domains (1) summary
    cd03118
    Location:58 → 293
    alpha_CA_V; Carbonic anhydrase alpha, CA isozyme V_like subgroup. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...

  2. XM_004944283.5 → XP_004944340.1  carbonic anhydrase 5A, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y1L3
    Related
    ENSGALP00010012845.1, ENSGALT00010022328.1
    Conserved Domains (1) summary
    cd03118
    Location:64 → 299
    alpha_CA_V; Carbonic anhydrase alpha, CA isozyme V_like subgroup. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    17985675..18001186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040681418.2 → XP_040537352.1  carbonic anhydrase 5A, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y5N8
    Conserved Domains (1) summary
    cd03118
    Location:58 → 293
    alpha_CA_V; Carbonic anhydrase alpha, CA isozyme V_like subgroup. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...

  2. XM_040681417.2 → XP_040537351.1  carbonic anhydrase 5A, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y1L3
    Conserved Domains (1) summary
    cd03118
    Location:64 → 299
    alpha_CA_V; Carbonic anhydrase alpha, CA isozyme V_like subgroup. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
Nucleotide Protein Strain
Heading Accession and Version

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