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SMIM4 small integral membrane protein 4 [ Gallus gallus (chicken) ]

Gene ID: 415896, updated on 17-Aug-2024

Summary

Symbol
SMIM4provided by CGNC
Full Name
small integral membrane protein 4provided by CGNC
Primary source
CGNC:15594
See related
Ensembl:ENSGALG00010028046
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
SNHG8
Orthologs
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Genomic context

See SMIM4 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
3
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 12 NC_052543.1 (767862..768777)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 12 NC_052584.1 (893844..894764)

Chromosome 12 - NC_052543.1Genomic Context describing neighboring genes Neighboring gene stabilin 1 Neighboring gene 5'-nucleotidase domain containing 2 Neighboring gene polybromo 1 Neighboring gene small nucleolar RNA SNORD19 Neighboring gene G protein nucleolar 3

Genomic regions, transcripts, and products

General protein information

Preferred Names
small integral membrane protein 4
Names
small nucleolar RNA host gene (non-protein coding) 8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001302175.2NP_001289104.1  small integral membrane protein 4

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000250
    UniProtKB/TrEMBL
    A0A1D5P063
    Conserved Domains (1) summary
    pfam15114
    Location:1468
    UPF0640; uncharacterized protein family UPF0640

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052543.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    767862..768777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015292732.4XP_015148218.1  small integral membrane protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P063
    Related
    ENSGALP00010041704.1, ENSGALT00010067961.1
    Conserved Domains (1) summary
    pfam15114
    Location:1468
    UPF0640; uncharacterized protein family UPF0640

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052584.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    893844..894764
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046926191.1XP_046782147.1  small integral membrane protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P063