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ZXDC ZXD family zinc finger C [ Gallus gallus (chicken) ]

Gene ID: 416034, updated on 17-Aug-2024

Summary

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Symbol
ZXDCprovided by CGNC
Full Name
ZXD family zinc finger Cprovided by CGNC
Primary source
CGNC:50141
See related
Ensembl:ENSGALG00010021190
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ZXDC in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 12 NC_052543.1 (10850372..10861712, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 12 NC_052584.1 (10878474..10889779, complement)

Chromosome 12 - NC_052543.1Genomic Context describing neighboring genes Neighboring gene Kruppel like factor 15 Neighboring gene microRNA 1731 Neighboring gene cilia and flagella associated protein 100 Neighboring gene uncharacterized LOC107054433 Neighboring gene urocanate hydratase 1 Neighboring gene netrin-4-like Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZXDC

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052543.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    10850372..10861712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_414374.8 → XP_414374.5  zinc finger protein ZXDC

    UniProtKB/TrEMBL
    A0A8V0ZIC0
    Related
    ENSGALP00010030536.1, ENSGALT00010051345.1
    Conserved Domains (3) summary
    COG5048
    Location:454 → 657
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:396 → 415
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:483 → 505
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052584.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    10878474..10889779 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040682336.2 → XP_040538270.1  zinc finger protein ZXDC

    Conserved Domains (3) summary
    COG5048
    Location:454 → 657
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:396 → 415
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:483 → 505
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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