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SEC24A SEC24 homolog A, COPII coat complex component [ Gallus gallus (chicken) ]

Gene ID: 416313, updated on 17-Aug-2024

Summary

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Symbol
SEC24Aprovided by CGNC
Full Name
SEC24 homolog A, COPII coat complex componentprovided by CGNC
Primary source
CGNC:4833
See related
Ensembl:ENSGALG00010013241
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See SEC24A in Genome Data Viewer
Location:
chromosome: 13
Exon count:
23
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (15318159..15341365, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (15329945..15353151, complement)

Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene thioredoxin domain containing 15 Neighboring gene C5orf24 homolog Neighboring gene DEAD-box helicase 46 Neighboring gene uncharacterized LOC121106746 Neighboring gene calcium modulating ligand Neighboring gene nascent polypeptide-associated complex subunit alpha, muscle-specific form-like Neighboring gene secretion associated Ras related GTPase 1B Neighboring gene jade family PHD finger 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in COPII-coated vesicle cargo loading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein transport protein Sec24A
Names
SEC24 family member A
SEC24 related gene family, member A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001321593.2 → NP_001308522.1  protein transport protein Sec24A

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000256
    UniProtKB/TrEMBL
    A0A8V0YJ92, E1BSA7
    Related
    ENSGALP00010018635.1, ENSGALT00010031828.1
    Conserved Domains (5) summary
    cd01479
    Location:508 → 750
    Sec24-like; Sec24-like: Protein and membrane traffic in eukaryotes is mediated by at least in part by the budding and fusion of intracellular transport vesicles that selectively carry cargo proteins and lipids from donor to acceptor organelles. The two main classes ...
    pfam00626
    Location:971 → 1038
    Gelsolin; Gelsolin repeat
    pfam04810
    Location:435 → 471
    zf-Sec23_Sec24; Sec23/Sec24 zinc finger
    pfam04815
    Location:850 → 945
    Sec23_helical; Sec23/Sec24 helical domain
    pfam08033
    Location:751 → 835
    Sec23_BS; Sec23/Sec24 beta-sandwich domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    15318159..15341365 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    15329945..15353151 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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