U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SEPTIN8 septin 8 [ Gallus gallus (chicken) ]

Gene ID: 416333, updated on 3-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
SEPTIN8provided by CGNC
Official Full Name
septin 8provided by CGNC
Primary source
CGNC:5210
See related
Ensembl:ENSGALG00010016402
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
SEPT8; Sep-08
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SEPTIN8 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (16593166..16625479, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (16604940..16637578, complement)

Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 3A Neighboring gene cyclin I family member 2 Neighboring gene sosondowah ankyrin repeat domain family member A Neighboring gene shroom family member 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. ESTs from brain and testis of White Leghorn and red junglefowl: annotation, bioinformatic classification of unknown transcripts and analysis of expression levels. Savolainen P, et al. Cytogenet Genome Res, 2005. PMID 16093725
  2. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
septin-8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001277806.2 → NP_001264735.2  septin-8

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000256
    UniProtKB/TrEMBL
    A0A8V0YP70, A0A8V0YVM0
    Related
    ENSGALP00010022797.1, ENSGALT00010039508.1
    Conserved Domains (2) summary
    PTZ00121
    Location:273 → 381
    PTZ00121; MAEBL; Provisional
    cd01850
    Location:39 → 307
    CDC_Septin; CDC/Septin GTPase family

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    16593166..16625479 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025154866.3 → XP_025010634.1  septin-8 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YP70
    Related
    ENSGALP00010022806.1, ENSGALT00010039517.1
    Conserved Domains (2) summary
    cd01850
    Location:39 → 305
    CDC_Septin; CDC/Septin GTPase family
    cl26511
    Location:271 → 379
    Neuromodulin_N; Gap junction protein N-terminal region

  2. XM_015294031.4 → XP_015149517.1  septin-8 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2U387, A0A8V0YP70
    Related
    ENSGALP00010022802.1, ENSGALT00010039513.1
    Conserved Domains (2) summary
    cd01850
    Location:39 → 307
    CDC_Septin; CDC/Septin GTPase family
    COG5019
    Location:21 → 382
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

  3. XM_025154867.3 → XP_025010635.1  septin-8 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YP70
    Conserved Domains (2) summary
    cd01850
    Location:39 → 305
    CDC_Septin; CDC/Septin GTPase family
    cl26511
    Location:271 → 379
    Neuromodulin_N; Gap junction protein N-terminal region

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    16604940..16637578 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046927035.1 → XP_046782991.1  septin-8 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YP70

  2. XM_046927034.1 → XP_046782990.1  septin-8 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2U387, A0A8V0YP70

  3. XM_046927036.1 → XP_046782992.1  septin-8 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YP70
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials