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NT5M 5',3'-nucleotidase, mitochondrial [ Gallus gallus (chicken) ]

Gene ID: 416505, updated on 17-Aug-2024

Summary

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Symbol
NT5Mprovided by CGNC
Full Name
5',3'-nucleotidase, mitochondrialprovided by CGNC
Primary source
CGNC:3594
See related
Ensembl:ENSGALG00010017495
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See NT5M in Genome Data Viewer
Location:
chromosome: 14
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (4762782..4769282)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (4757394..4763889)

Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene phospholipase D family member 6 Neighboring gene folliculin Neighboring gene COP9 signalosome subunit 3 Neighboring gene uncharacterized LOC124417208 Neighboring gene mediator complex subunit 9 Neighboring gene ras related dexamethasone induced 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-nucleotidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyrimidine deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5'(3')-deoxyribonucleotidase, mitochondrial
XP_040539359.1
XP_414809.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4762782..4769282
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_414809.8 → XP_414809.2  5'(3')-deoxyribonucleotidase, mitochondrial

    UniProtKB/TrEMBL
    A0A8V0Z2T9
    Related
    ENSGALP00010024775.1, ENSGALT00010042272.1
    Conserved Domains (1) summary
    cd02587
    Location:35 → 198
    HAD_5-3dNT; 5'(3')-deoxyribonucleotidase

RNA

  1. XR_003077757.3 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4757394..4763889
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040683425.2 → XP_040539359.1  5'(3')-deoxyribonucleotidase, mitochondrial

    UniProtKB/TrEMBL
    A0A8V0Z2T9
    Conserved Domains (1) summary
    cd02587
    Location:35 → 198
    HAD_5-3dNT; 5'(3')-deoxyribonucleotidase

RNA

  1. XR_005854100.2 RNA Sequence

Nucleotide Protein
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Molecular Biology Databases
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