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IL21R interleukin 21 receptor [ Gallus gallus (chicken) ]

Gene ID: 416586, updated on 3-Dec-2024

Summary

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Symbol
IL21Rprovided by CGNC
Full Name
interleukin 21 receptorprovided by CGNC
Primary source
CGNC:4749
See related
Ensembl:ENSGALG00010017285
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See IL21R in Genome Data Viewer
Location:
chromosome: 14
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (7316405..7332566)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (7312042..7328202)

Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene NSE1 homolog, SMC5-SMC6 complex component Neighboring gene microRNA 6548 Neighboring gene interleukin 4 receptor Neighboring gene interleukin 9 receptor Neighboring gene 3-phosphoinositide dependent protein kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immunoglobulin mediated immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interleukin-21 receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030640.2 → NP_001025811.2  interleukin-21 receptor precursor

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000257
    UniProtKB/TrEMBL
    F1P495, Q5F4A6
    Conserved Domains (1) summary
    cd00063
    Location:122 → 226
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7316405..7332566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046900642.1 → XP_046756598.1  interleukin-21 receptor isoform X3

    UniProtKB/TrEMBL
    Q5F4A6

  2. XM_025155100.3 → XP_025010868.1  interleukin-21 receptor isoform X2

    UniProtKB/TrEMBL
    F1P495, Q5F4A6
    Related
    ENSGALP00010024375.1, ENSGALT00010041671.1
    Conserved Domains (1) summary
    cd00063
    Location:122 → 226
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  3. XM_040647381.2 → XP_040503315.1  interleukin-21 receptor isoform X1

    UniProtKB/TrEMBL
    A0A3Q2UB88, Q5F4A6
    Related
    ENSGALP00010024370.1, ENSGALT00010041663.1
    Conserved Domains (1) summary
    cd00063
    Location:148 → 252
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7312042..7328202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046927431.1 → XP_046783387.1  interleukin-21 receptor isoform X4

    UniProtKB/TrEMBL
    Q5F4A6

  2. XM_046927433.1 → XP_046783389.1  interleukin-21 receptor isoform X2

    UniProtKB/TrEMBL
    F1P495, Q5F4A6

  3. XM_046927432.1 → XP_046783388.1  interleukin-21 receptor isoform X1

    UniProtKB/TrEMBL
    A0A3Q2UB88, Q5F4A6
Nucleotide Protein Strain
Heading Accession and Version

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