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PDPK1 3-phosphoinositide dependent protein kinase 1 [ Gallus gallus (chicken) ]

Gene ID: 416588, updated on 3-Dec-2024

Summary

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Symbol
PDPK1provided by CGNC
Full Name
3-phosphoinositide dependent protein kinase 1provided by CGNC
Primary source
CGNC:50287
See related
Ensembl:ENSGALG00010020316
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See PDPK1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
21
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (7351335..7382398)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (7346992..7378035)

Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene interleukin 21 receptor Neighboring gene interleukin 9 receptor Neighboring gene potassium channel tetramerization domain containing 5 Neighboring gene ubiquitin conjugating enzyme E2 I

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-phosphoinositide-dependent protein kinase 1
NP_001012547.1
XP_040503316.1
XP_040503317.1
XP_040503320.1
XP_040503321.1
XP_040503322.1
XP_040503324.1
XP_040503325.1
XP_046756599.1
XP_046756600.1
XP_046756601.1
XP_046756602.1
XP_046783390.1
XP_046783391.1
XP_046783392.1
XP_046783393.1
XP_046783394.1
XP_046783395.1
XP_046783396.1
XP_046783397.1
XP_046783398.1
XP_046783399.1
XP_046783400.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001012529.2 → NP_001012547.1  3-phosphoinositide-dependent protein kinase 1

    See identical proteins and their annotated locations for NP_001012547.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000257
    UniProtKB/TrEMBL
    A0A8V0ZDR4, Q5F3U4
    Conserved Domains (3) summary
    smart00220
    Location:85 → 345
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd01262
    Location:444 → 550
    PH_PDK1; 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain
    cd05581
    Location:83 → 345
    STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7351335..7382398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040647382.1 → XP_040503316.1  3-phosphoinositide-dependent protein kinase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZDR4
    Related
    ENSGALP00010028994.1, ENSGALT00010049042.1
    Conserved Domains (2) summary
    cd01262
    Location:518 → 624
    PH_PDK1; 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain
    cd05581
    Location:157 → 419
    STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

  2. XM_040647390.2 → XP_040503324.1  3-phosphoinositide-dependent protein kinase 1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZDR4
    Conserved Domains (1) summary
    cd05581
    Location:157 → 419
    STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

  3. XM_040647388.2 → XP_040503322.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PJA6, A0A8V0ZDR4
    Related
    ENSGALP00010028984.1, ENSGALT00010049030.1
    Conserved Domains (2) summary
    cd01262
    Location:417 → 523
    PH_PDK1; 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain
    cd05581
    Location:56 → 318
    STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

  4. XM_046900646.1 → XP_046756602.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PJA6, A0A8V0ZDR4

  5. XM_046900644.1 → XP_046756600.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PJA6, A0A8V0ZDR4

  6. XM_046900643.1 → XP_046756599.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PJA6, A0A8V0ZDR4

  7. XM_040647387.2 → XP_040503321.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PJA6, A0A8V0ZDR4
    Conserved Domains (2) summary
    cd01262
    Location:417 → 523
    PH_PDK1; 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain
    cd05581
    Location:56 → 318
    STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

  8. XM_040647386.2 → XP_040503320.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PJA6, A0A8V0ZDR4
    Conserved Domains (2) summary
    cd01262
    Location:417 → 523
    PH_PDK1; 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain
    cd05581
    Location:56 → 318
    STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

  9. XM_046900645.1 → XP_046756601.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PJA6, A0A8V0ZDR4

  10. XM_040647391.2 → XP_040503325.1  3-phosphoinositide-dependent protein kinase 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0ZDR4
    Conserved Domains (1) summary
    cd05581
    Location:83 → 345
    STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

  11. XM_040647383.1 → XP_040503317.1  3-phosphoinositide-dependent protein kinase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZDR4, A0A8V0ZK64, A0A8V0ZK69
    Related
    ENSGALP00010028989.1, ENSGALT00010049035.1
    Conserved Domains (2) summary
    cd01262
    Location:445 → 551
    PH_PDK1; 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain
    cd05581
    Location:84 → 346
    STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7346992..7378035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046927434.1 → XP_046783390.1  3-phosphoinositide-dependent protein kinase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZDR4

  2. XM_046927443.1 → XP_046783399.1  3-phosphoinositide-dependent protein kinase 1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZDR4

  3. XM_046927441.1 → XP_046783397.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PJA6, A0A8V0ZDR4

  4. XM_046927442.1 → XP_046783398.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PJA6, A0A8V0ZDR4

  5. XM_046927438.1 → XP_046783394.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PJA6, A0A8V0ZDR4

  6. XM_046927436.1 → XP_046783392.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PJA6, A0A8V0ZDR4

  7. XM_046927439.1 → XP_046783395.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PJA6, A0A8V0ZDR4

  8. XM_046927437.1 → XP_046783393.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PJA6, A0A8V0ZDR4

  9. XM_046927440.1 → XP_046783396.1  3-phosphoinositide-dependent protein kinase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5PJA6, A0A8V0ZDR4

  10. XM_046927444.1 → XP_046783400.1  3-phosphoinositide-dependent protein kinase 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0ZDR4

  11. XM_046927435.1 → XP_046783391.1  3-phosphoinositide-dependent protein kinase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZDR4, A0A8V0ZK64, A0A8V0ZK69
Nucleotide Protein Strain
Heading Accession and Version

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