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UBE2H ubiquitin conjugating enzyme E2 H [ Gallus gallus (chicken) ]

Gene ID: 416678, updated on 17-Aug-2024

Summary

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Symbol
UBE2Hprovided by CGNC
Full Name
ubiquitin conjugating enzyme E2 Hprovided by CGNC
Primary source
CGNC:6039
See related
Ensembl:ENSGALG00010006496
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See UBE2H in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (1391668..1435859, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (1398453..1442741, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene microRNA 183 Neighboring gene microRNA mir-96 Neighboring gene zinc finger C3HC-type containing 1 Neighboring gene kelch domain containing 10 Neighboring gene microRNA 6629

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SUMO conjugating enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin conjugating enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein sumoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-conjugating enzyme E2 H
Names
ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast)
NP_001025818.1
XP_046783673.1
XP_046783685.1
XP_046783707.1
XP_046783739.1
XP_046783749.1
XP_046783777.1
XP_046783812.1
XP_046783840.1
XP_046783855.1
XP_046783872.1
XP_046783905.1
XP_046783913.1
XP_046783982.1
XP_046784037.1
XP_046784083.1
XP_046784117.1
XP_046784171.1
XP_046784227.1
XP_046784246.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030647.2 → NP_001025818.1  ubiquitin-conjugating enzyme E2 H

    See identical proteins and their annotated locations for NP_001025818.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000006
    UniProtKB/TrEMBL
    F1NRU8, Q5ZLI7
    Related
    ENSGALP00010009035.1, ENSGALT00010015479.1
    Conserved Domains (1) summary
    pfam00179
    Location:31 → 145
    UQ_con; Ubiquitin-conjugating enzyme

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1391668..1435859 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046927783.1 → XP_046783739.1  ubiquitin-conjugating enzyme E2 H isoform X1

  2. XM_046928271.1 → XP_046784227.1  ubiquitin-conjugating enzyme E2 H isoform X1

  3. XM_046928161.1 → XP_046784117.1  ubiquitin-conjugating enzyme E2 H isoform X1

  4. XM_046927949.1 → XP_046783905.1  ubiquitin-conjugating enzyme E2 H isoform X1

  5. XM_046928290.1 → XP_046784246.1  ubiquitin-conjugating enzyme E2 H isoform X1

  6. XM_046927916.1 → XP_046783872.1  ubiquitin-conjugating enzyme E2 H isoform X1

  7. XM_046928215.1 → XP_046784171.1  ubiquitin-conjugating enzyme E2 H isoform X1

  8. XM_046928127.1 → XP_046784083.1  ubiquitin-conjugating enzyme E2 H isoform X1

  9. XM_046927793.1 → XP_046783749.1  ubiquitin-conjugating enzyme E2 H isoform X1

  10. XM_046927957.1 → XP_046783913.1  ubiquitin-conjugating enzyme E2 H isoform X1

  11. XM_046928081.1 → XP_046784037.1  ubiquitin-conjugating enzyme E2 H isoform X1

  12. XM_046928026.1 → XP_046783982.1  ubiquitin-conjugating enzyme E2 H isoform X1

  13. XM_046927821.1 → XP_046783777.1  ubiquitin-conjugating enzyme E2 H isoform X1

  14. XM_046927751.1 → XP_046783707.1  ubiquitin-conjugating enzyme E2 H isoform X1

  15. XM_046927899.1 → XP_046783855.1  ubiquitin-conjugating enzyme E2 H isoform X1

  16. XM_046927884.1 → XP_046783840.1  ubiquitin-conjugating enzyme E2 H isoform X1

  17. XM_046927856.1 → XP_046783812.1  ubiquitin-conjugating enzyme E2 H isoform X1

  18. XM_046927729.1 → XP_046783685.1  ubiquitin-conjugating enzyme E2 H isoform X1

  19. XM_046927717.1 → XP_046783673.1  ubiquitin-conjugating enzyme E2 H isoform X1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1398453..1442741 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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