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AMDHD2 amidohydrolase domain containing 2 [ Gallus gallus (chicken) ]

Gene ID: 416754, updated on 17-Aug-2024

Summary

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Official Symbol
AMDHD2provided by CGNC
Official Full Name
amidohydrolase domain containing 2provided by CGNC
Primary source
CGNC:7016
See related
Ensembl:ENSGALG00010017468
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See AMDHD2 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (13890918..13898041, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (14010285..14017408, complement)

Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene RNA binding protein with serine rich domain 1 Neighboring gene uncharacterized LOC416755 Neighboring gene uncharacterized LOC112533456 Neighboring gene ATPase H+ transporting V0 subunit c Neighboring gene TBC1 domain family member 24

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. International Chicken Genome Sequencing Consortium. Nature, 2004 Dec 9. PMID 15592404
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine-6-phosphate deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylglucosamine-6-phosphate deacetylase
Names
putative N-acetylglucosamine-6-phosphate deacetylase
NP_001332924.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001345995.2 → NP_001332924.1  N-acetylglucosamine-6-phosphate deacetylase

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000257
    UniProtKB/TrEMBL
    A0A8V0Z0X9, F1P5J8
    Related
    ENSGALP00010024717.1, ENSGALT00010042186.1

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    13890918..13898041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001469162.4 RNA Sequence

  2. XR_001469161.4 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    14010285..14017408 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_006936200.1 RNA Sequence

  2. XR_006936199.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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