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GLT1D1 glycosyltransferase 1 domain containing 1 [ Gallus gallus (chicken) ]

Gene ID: 416807, updated on 3-Dec-2024

Summary

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Symbol
GLT1D1provided by CGNC
Full Name
glycosyltransferase 1 domain containing 1provided by CGNC
Primary source
CGNC:1930
See related
Ensembl:ENSGALG00010020765
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See GLT1D1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
15
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (3733708..3776155, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (3738052..3780183, complement)

Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene frizzled class receptor 10 Neighboring gene uncharacterized LOC112533518 Neighboring gene transmembrane protein 132D Neighboring gene uncharacterized LOC112533519 Neighboring gene solute carrier family 15 member 4 Neighboring gene transmembrane protein 132C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase 1 domain-containing protein 1
NP_001025827.1
NP_001384387.1
XP_040503931.1
XP_046757080.1
XP_046757081.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030656.2 → NP_001025827.1  glycosyltransferase 1 domain-containing protein 1 isoform 2

    See identical proteins and their annotated locations for NP_001025827.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000260
    UniProtKB/TrEMBL
    A0A8V0ZFY9, Q5ZLV8
    Related
    ENSGALP00010029679.1, ENSGALT00010050222.1
    Conserved Domains (2) summary
    COG0438
    Location:68 → 323
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cl10013
    Location:57 → 318
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...

  2. NM_001397458.1 → NP_001384387.1  glycosyltransferase 1 domain-containing protein 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000260
    UniProtKB/TrEMBL
    A0A8V0ZFX5
    Related
    ENSGALP00010029668.1, ENSGALT00010050211.1
    Conserved Domains (1) summary
    cd03801
    Location:42 → 327
    GT4_PimA-like; phosphatidyl-myo-inositol mannosyltransferase

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    3733708..3776155 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046901124.1 → XP_046757080.1  glycosyltransferase 1 domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZFY9, Q5ZLV8

  2. XM_046901125.1 → XP_046757081.1  glycosyltransferase 1 domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZFY9, Q5ZLV8

  3. XM_040647997.2 → XP_040503931.1  glycosyltransferase 1 domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZFX9, A0A8V0ZFY9
    Related
    ENSGALP00010029673.1, ENSGALT00010050216.1
    Conserved Domains (1) summary
    cd03801
    Location:46 → 331
    GT4_PimA-like; phosphatidyl-myo-inositol mannosyltransferase

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    3738052..3780183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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