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ANAPC5 anaphase promoting complex subunit 5 [ Gallus gallus (chicken) ]

Gene ID: 416842, updated on 7-Dec-2024

Summary

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Symbol
ANAPC5provided by CGNC
Full Name
anaphase promoting complex subunit 5provided by CGNC
Primary source
CGNC:3068
See related
Ensembl:ENSGALG00010025256
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ANAPC5 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
17
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (5467815..5479469, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (5478469..5490116, complement)

Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene purinergic receptor P2X 7 Neighboring gene purinergic receptor P2X 4 Neighboring gene uncharacterized LOC124417227 Neighboring gene calcium/calmodulin dependent protein kinase kinase 2 Neighboring gene ring finger protein 34 Neighboring gene lysine demethylase 2B Neighboring gene ORAI calcium release-activated calcium modulator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anaphase-promoting complex-dependent catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of mitotic metaphase/anaphase transition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K11-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of anaphase-promoting complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anaphase-promoting complex subunit 5
Names
APC5
cyclosome subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006187.1 → NP_001006187.1  anaphase-promoting complex subunit 5

    See identical proteins and their annotated locations for NP_001006187.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ720081
    UniProtKB/Swiss-Prot
    Q5ZKK3
    UniProtKB/TrEMBL
    A0A8V1A4E4
    Related
    ENSGALP00010038069.1, ENSGALT00010061644.1
    Conserved Domains (3) summary
    sd00016
    Location:248 → 282
    Apc5; TPR repeat [structural motif]
    pfam12862
    Location:254 → 347
    ANAPC5; Anaphase-promoting complex subunit 5
    cd16270
    Location:32 → 161
    Apc5_N; N-terminal domain of the anaphase-promoting complex subunit Apc5 (or Anapc5)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5467815..5479469 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5478469..5490116 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZKK3.1 GenPept UniProtKB/Swiss-Prot:Q5ZKK3

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials