U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Cht5 Chitinase 5 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41687, updated on 9-Dec-2024

Summary

Official Symbol
Cht5provided by FlyBase
Official Full Name
Chitinase 5provided by FlyBase
Primary source
FLYBASE:FBgn0038180
Locus tag
Dmel_CG9307
See related
AllianceGenome:FB:FBgn0038180
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG9307; Cht; cht5; DmCht5; DmCHT5; Dmel\CG9307
Summary
Enables chitin binding activity and chitinase activity. Involved in several processes, including chitin catabolic process; ecdysis, chitin-based cuticle; and regulation of tube size, open tracheal system. Located in extracellular space. Is expressed in tracheal primordium. Human ortholog(s) of this gene implicated in asthma. Orthologous to human CHIA (chitinase acidic). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Cht5 in Genome Data Viewer
Location:
87F13-87F13; 3-54 cM
Exon count:
7
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (13767549..13770732)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (9593271..9596454)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Ubiquitin conjugating enzyme 87F Neighboring gene kramer Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables chitin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables chitin binding IDA
Inferred from Direct Assay
more info
PubMed 
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 
enables chitinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables chitinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables chitinase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in chitin catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in chitin catabolic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in chitin catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in chitin-based cuticle development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in ecdysis, chitin-based cuticle IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of tube size, open tracheal system IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in wound healing IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in extracellular region IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
chitinase 5
Names
CG9307-PA
Cht5-PA
chitin-binding peritrophin-A
NP_650314.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    13767549..13770732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_142057.3NP_650314.1  chitinase 5 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650314.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VFR3
    Related
    FBpp0082294
    Conserved Domains (4) summary
    pfam05887
    Location:367469
    Trypan_PARP; Procyclic acidic repetitive protein (PARP)
    cd02872
    Location:29397
    GH18_chitolectin_chitotriosidase; This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active ...
    smart00636
    Location:28379
    Glyco_18; Glyco_18 domain
    pfam01607
    Location:531578
    CBM_14; Chitin binding Peritrophin-A domain