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TMEM116 transmembrane protein 116 [ Gallus gallus (chicken) ]

Gene ID: 416881, updated on 17-Aug-2024

Summary

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Symbol
TMEM116provided by CGNC
Full Name
transmembrane protein 116provided by CGNC
Primary source
CGNC:3531
See related
Ensembl:ENSGALG00010025924
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See TMEM116 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (6263012..6276738, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (6273758..6287475, complement)

Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121106893 Neighboring gene disintegrin and metalloproteinase domain-containing protein 9-like Neighboring gene ADAM metallopeptidase domain 20-like Neighboring gene endoplasmic reticulum protein 29 Neighboring gene N(alpha)-acetyltransferase 25, NatB auxiliary subunit Neighboring gene TRAF-type zinc finger domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 116

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    6263012..6276738 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004945604.5 → XP_004945661.1  transmembrane protein 116 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AC22
    Conserved Domains (2) summary
    cd14964
    Location:266 → 291
    7tm_GPCRs; TM helix 6 [structural motif]
    cl28897
    Location:220 → 326
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  2. XM_015275547.4 → XP_015131033.2  transmembrane protein 116 isoform X2

    UniProtKB/TrEMBL
    A0A8V1A9Q4
    Related
    ENSGALP00010039006.1, ENSGALT00010063192.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6273758..6287475 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040684640.2 → XP_040540574.1  transmembrane protein 116 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AC22
    Conserved Domains (2) summary
    cd14964
    Location:266 → 291
    7tm_GPCRs; TM helix 6 [structural motif]
    cl28897
    Location:220 → 326
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

  2. XM_040684641.2 → XP_040540575.2  transmembrane protein 116 isoform X2

    UniProtKB/TrEMBL
    A0A8V1A9Q4
Nucleotide Protein Strain
Heading Accession and Version

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