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FICD FIC domain containing [ Gallus gallus (chicken) ]

Gene ID: 416889, updated on 17-Aug-2024

Summary

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Symbol
FICDprovided by CGNC
Full Name
FIC domain containingprovided by CGNC
Primary source
CGNC:50368
See related
Ensembl:ENSGALG00010022441
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See FICD in Genome Data Viewer
Location:
chromosome: 15
Exon count:
3
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (6517281..6521498)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (6527795..6532013)

Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene WSC domain containing 2 Neighboring gene chemerin chemokine-like receptor 1 Neighboring gene squamous cell carcinoma antigen recognized by T-cells 3 Neighboring gene iron-sulfur cluster assembly enzyme Neighboring gene transmembrane protein 119

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein adenylyltransferase FICD
XP_004945669.1
XP_040540608.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    6517281..6521498
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004945612.5 → XP_004945669.1  protein adenylyltransferase FICD

    UniProtKB/TrEMBL
    A0A8V0ZQ41, A0A8V0ZVQ8
    Related
    ENSGALP00010032951.1, ENSGALT00010054545.1
    Conserved Domains (3) summary
    COG0457
    Location:139 → 234
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    COG3177
    Location:269 → 478
    COG3177; Fic family protein [Transcription]
    sd00006
    Location:148 → 176
    TPR; TPR repeat [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6527795..6532013
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040684674.2 → XP_040540608.1  protein adenylyltransferase FICD

    UniProtKB/TrEMBL
    A0A8V0ZQ41, A0A8V0ZVQ8
    Conserved Domains (3) summary
    COG0457
    Location:139 → 234
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    COG3177
    Location:269 → 478
    COG3177; Fic family protein [Transcription]
    sd00006
    Location:148 → 176
    TPR; TPR repeat [structural motif]
Nucleotide Protein
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