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LOC416924 thyroid adenoma-associated protein homolog [ Gallus gallus (chicken) ]

Gene ID: 416924, updated on 17-Aug-2024

Summary

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Symbol
LOC416924provided by CGNC
Full Name
thyroid adenoma-associated protein homologprovided by CGNC
Primary source
CGNC:50379
See related
Ensembl:ENSGALG00010023989
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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Genomic context

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See LOC416924 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
31
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (7855848..7866317, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (7866124..7876592, complement)

Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene sushi domain containing 2 Neighboring gene WW domain-binding protein 11-like Neighboring gene somatomedin B and thrombospondin type 1 domain containing Neighboring gene microRNA mir-12228 Neighboring gene goosecoid homeobox 2 Neighboring gene DiGeorge syndrome critical region gene 14 Neighboring gene DiGeorge syndrome critical region gene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thyroid adenoma-associated protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7855848..7866317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015275471.4 → XP_015130957.2  thyroid adenoma-associated protein homolog isoform X4

    Conserved Domains (1) summary
    cl19897
    Location:950 → 1305
    DUF2428; Putative death-receptor fusion protein (DUF2428)

  2. XM_015275469.4 → XP_015130955.2  thyroid adenoma-associated protein homolog isoform X2

    UniProtKB/TrEMBL
    A0A8V1A2N0
    Related
    ENSGALP00010035498.1, ENSGALT00010058418.1
    Conserved Domains (1) summary
    cl19897
    Location:978 → 1333
    DUF2428; Putative death-receptor fusion protein (DUF2428)

  3. XM_015275470.4 → XP_015130956.2  thyroid adenoma-associated protein homolog isoform X3

    Conserved Domains (1) summary
    cl19897
    Location:979 → 1334
    DUF2428; Putative death-receptor fusion protein (DUF2428)

  4. XM_040648107.2 → XP_040504041.1  thyroid adenoma-associated protein homolog isoform X1

    Conserved Domains (1) summary
    cl19897
    Location:979 → 1334
    DUF2428; Putative death-receptor fusion protein (DUF2428)

  5. XM_040648108.2 → XP_040504042.1  thyroid adenoma-associated protein homolog isoform X5

    Conserved Domains (1) summary
    cl19897
    Location:979 → 1334
    DUF2428; Putative death-receptor fusion protein (DUF2428)

  6. XM_040648110.2 → XP_040504044.1  thyroid adenoma-associated protein homolog isoform X7

    Conserved Domains (1) summary
    cl19897
    Location:979 → 1334
    DUF2428; Putative death-receptor fusion protein (DUF2428)

  7. XM_040648109.2 → XP_040504043.1  thyroid adenoma-associated protein homolog isoform X6

    Conserved Domains (1) summary
    cl19897
    Location:979 → 1334
    DUF2428; Putative death-receptor fusion protein (DUF2428)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7866124..7876592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046928390.1 → XP_046784346.1  thyroid adenoma-associated protein homolog isoform X4

  2. XM_046928388.1 → XP_046784344.1  thyroid adenoma-associated protein homolog isoform X2

  3. XM_046928389.1 → XP_046784345.1  thyroid adenoma-associated protein homolog isoform X3

  4. XM_046928387.1 → XP_046784343.1  thyroid adenoma-associated protein homolog isoform X1

  5. XM_040684761.2 → XP_040540695.1  thyroid adenoma-associated protein homolog isoform X7

    Conserved Domains (1) summary
    cl19897
    Location:979 → 1334
    DUF2428; Putative death-receptor fusion protein (DUF2428)

  6. XM_040684760.2 → XP_040540694.1  thyroid adenoma-associated protein homolog isoform X6

    Conserved Domains (1) summary
    cl19897
    Location:979 → 1334
    DUF2428; Putative death-receptor fusion protein (DUF2428)

RNA

  1. XR_005854422.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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