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Mst87F Male-specific RNA 87F [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41693, updated on 9-Dec-2024

Summary

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Official Symbol
Mst87Fprovided by FlyBase
Official Full Name
Male-specific RNA 87Fprovided by FlyBase
Primary source
FLYBASE:FBgn0002862
Locus tag
Dmel_CG17956
See related
AllianceGenome:FB:FBgn0002862
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BEST:GH23081; bs35f12.y1; CG17956; Dmel\CG17956; Mst; mst(3)87F; mst(3)gl-9; mst(3)gl9; mst-9; mst87F; MST87F
Summary
Predicted to enable structural molecule activity. Involved in spermatogenesis. Located in sperm flagellum. Is expressed in testis. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See Mst87F in Genome Data Viewer
Location:
87F14-87F14; 3-54 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (13827151..13828008, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (9652873..9653730, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43641 Neighboring gene long non-coding RNA:CR43642 Neighboring gene long non-coding RNA:CR43300 Neighboring gene N-ethylmaleimide-sensitive factor 2 Neighboring gene uncharacterized protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Data indicate that the Translational Control Element (TCE) is necessary for the transcription of testes-specific genes Mst84Dc, Mst87F, CG7557, CG14305 and CG31245.
    Title: The Drosophila Translational Control Element (TCE) is required for high-level transcription of many genes that are specifically expressed in testes.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural molecule activity ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in spermatogenesis IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in sperm flagellum IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Male-specific RNA 87F
Names
CG17956-PA
CG17956-PB
Mst87F-PA
Mst87F-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    13827151..13828008 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001300388.1 → NP_001287317.1  Male-specific RNA 87F, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287317.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0ANE9, A0ANF2, A0ANF8, B6IDT2, C0MHZ0, C0MHZ1, P08175, Q9VFQ6
    UniProtKB/TrEMBL
    A0A0B4LH76

  2. NM_079622.4 → NP_524346.1  Male-specific RNA 87F, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524346.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0ANE9, A0ANF2, A0ANF8, B6IDT2, C0MHZ0, C0MHZ1, P08175, Q9VFQ6
    UniProtKB/TrEMBL
    A0A0B4LH76
    Related
    FBpp0082347
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4LH76 A0A0B4LH76
P08175.1 P08175

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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