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MTMR3 myotubularin related protein 3 [ Gallus gallus (chicken) ]

Gene ID: 417015, updated on 3-Dec-2024

Summary

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Official Symbol
MTMR3provided by CGNC
Official Full Name
myotubularin related protein 3provided by CGNC
Primary source
CGNC:6094
See related
Ensembl:ENSGALG00010000263
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See MTMR3 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
28
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (10928494..11002933, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (10940269..11014688, complement)

Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene HORMA domain containing 2 Neighboring gene putative acyl-CoA dehydrogenase AidB-like Neighboring gene activating signal cointegrator 1 complex subunit 2 Neighboring gene ubiquinol-cytochrome c reductase, complex III subunit X

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR3; myotubularin-related protein 3
NP_001292595.2
NP_001384455.1
XP_015150329.2
XP_040504017.1
XP_040504021.1
XP_040504022.1
XP_040504023.1
XP_040504024.1
XP_046757122.1
XP_046757123.1
XP_046757124.1
XP_046757125.1
XP_046757126.1
XP_046757127.1
XP_046757128.1
XP_046757129.1
XP_046757130.1
XP_046757131.1
XP_046757132.1
XP_046784169.1
XP_046784170.1
XP_046784172.1
XP_046784173.1
XP_046784174.1
XP_046784175.1
XP_046784176.1
XP_046784177.1
XP_046784178.1
XP_046784179.1
XP_046784180.1
XP_046784181.1
XP_046784182.1
XP_046784183.1
XP_046784184.1
XP_046784185.1
XP_046784186.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001305666.2 → NP_001292595.2  phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR3

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000260
    UniProtKB/TrEMBL
    A0A8V0X4W3, A0A8V0X6S7
    Related
    ENSGALP00010000286.1, ENSGALT00010000513.1

  2. NM_001397526.1 → NP_001384455.1  phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR3

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000260
    UniProtKB/TrEMBL
    A0A8V0X4W3, A0A8V0X6S7
    Related
    ENSGALP00010000290.1, ENSGALT00010000517.1

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    10928494..11002933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040648090.2 → XP_040504024.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X4W3
    Conserved Domains (3) summary
    cd15732
    Location:1125 → 1194
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:180 → 496
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 147
    PH-like; Pleckstrin homology-like domain

  2. XM_040648088.2 → XP_040504022.1  myotubularin-related protein 3 isoform X9

    UniProtKB/TrEMBL
    A0A8V0X4W3
    Conserved Domains (3) summary
    cd15732
    Location:1176 → 1245
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:231 → 547
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:74 → 198
    PH-like; Pleckstrin homology-like domain

  3. XM_046901172.1 → XP_046757128.1  myotubularin-related protein 3 isoform X8

    UniProtKB/TrEMBL
    A0A8V0X2L8, A0A8V0X4W3
    Related
    ENSGALP00010000287.1, ENSGALT00010000514.1

  4. XM_046901171.1 → XP_046757127.1  myotubularin-related protein 3 isoform X7

    UniProtKB/TrEMBL
    A0A8V0X4W3, A0A8V0X754
    Related
    ENSGALP00010000289.1, ENSGALT00010000516.1

  5. XM_046901169.1 → XP_046757125.1  myotubularin-related protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A8V0X4W3, A0A8V0X6S7

  6. XM_046901168.1 → XP_046757124.1  myotubularin-related protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A8V0X4W3, A0A8V0X749
    Related
    ENSGALP00010000284.1, ENSGALT00010000511.1

  7. XM_046901170.1 → XP_046757126.1  myotubularin-related protein 3 isoform X6

    UniProtKB/TrEMBL
    A0A8V0X4W3

  8. XM_040648083.2 → XP_040504017.1  myotubularin-related protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A8V0X4W3
    Conserved Domains (3) summary
    cd15732
    Location:1088 → 1157
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:180 → 496
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 147
    PH-like; Pleckstrin homology-like domain

  9. XM_046901167.1 → XP_046757123.1  myotubularin-related protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8V0X4W3

  10. XM_046901166.1 → XP_046757122.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X4W3

  11. XM_040648089.2 → XP_040504023.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X4W3
    Conserved Domains (3) summary
    cd15732
    Location:1125 → 1194
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:180 → 496
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 147
    PH-like; Pleckstrin homology-like domain

  12. XM_040648087.2 → XP_040504021.1  myotubularin-related protein 3 isoform X9

    UniProtKB/TrEMBL
    A0A8V0X4W3
    Conserved Domains (3) summary
    cd15732
    Location:1176 → 1245
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:231 → 547
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:74 → 198
    PH-like; Pleckstrin homology-like domain

  13. XM_046901176.1 → XP_046757132.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X4W3

  14. XM_046901174.1 → XP_046757130.1  myotubularin-related protein 3 isoform X9

    UniProtKB/TrEMBL
    A0A8V0X4W3

  15. XM_046901175.1 → XP_046757131.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X4W3

  16. XM_046901173.1 → XP_046757129.1  myotubularin-related protein 3 isoform X9

    UniProtKB/TrEMBL
    A0A8V0X4W3

  17. XM_015294843.4 → XP_015150329.2  myotubularin-related protein 3 isoform X10

    Conserved Domains (2) summary
    cd15732
    Location:920 → 989
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cl28904
    Location:30 → 291
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    10940269..11014688 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046928227.1 → XP_046784183.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X4W3

  2. XM_046928225.1 → XP_046784181.1  myotubularin-related protein 3 isoform X9

    UniProtKB/TrEMBL
    A0A8V0X4W3

  3. XM_046928221.1 → XP_046784177.1  myotubularin-related protein 3 isoform X8

    UniProtKB/TrEMBL
    A0A8V0X4W3

  4. XM_046928220.1 → XP_046784176.1  myotubularin-related protein 3 isoform X7

    UniProtKB/TrEMBL
    A0A8V0X4W3

  5. XM_046928217.1 → XP_046784173.1  myotubularin-related protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A8V0X4W3

  6. XM_046928216.1 → XP_046784172.1  myotubularin-related protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A8V0X4W3

  7. XM_046928219.1 → XP_046784175.1  myotubularin-related protein 3 isoform X6

    UniProtKB/TrEMBL
    A0A8V0X4W3

  8. XM_046928218.1 → XP_046784174.1  myotubularin-related protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A8V0X4W3

  9. XM_046928214.1 → XP_046784170.1  myotubularin-related protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8V0X4W3

  10. XM_046928213.1 → XP_046784169.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X4W3

  11. XM_046928226.1 → XP_046784182.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X4W3

  12. XM_046928222.1 → XP_046784178.1  myotubularin-related protein 3 isoform X9

    UniProtKB/TrEMBL
    A0A8V0X4W3

  13. XM_046928229.1 → XP_046784185.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X4W3

  14. XM_046928224.1 → XP_046784180.1  myotubularin-related protein 3 isoform X9

    UniProtKB/TrEMBL
    A0A8V0X4W3

  15. XM_046928228.1 → XP_046784184.1  myotubularin-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X4W3

  16. XM_046928223.1 → XP_046784179.1  myotubularin-related protein 3 isoform X9

    UniProtKB/TrEMBL
    A0A8V0X4W3

  17. XM_046928230.1 → XP_046784186.1  myotubularin-related protein 3 isoform X10

Nucleotide Protein Strain
Heading Accession and Version

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