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SARDH sarcosine dehydrogenase [ Gallus gallus (chicken) ]

Gene ID: 417146, updated on 17-Aug-2024

Summary

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Symbol
SARDHprovided by CGNC
Full Name
sarcosine dehydrogenaseprovided by CGNC
Primary source
CGNC:2060
See related
Ensembl:ENSGALG00010028881
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See SARDH in Genome Data Viewer
Location:
chromosome: 17
Exon count:
23
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (7632458..7655380, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (7044048..7063527, complement)

Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene ADAMTS like 2 Neighboring gene family with sequence similarity 163 member B Neighboring gene dopamine beta-hydroxylase Neighboring gene vav guanine nucleotide exchange factor 2 Neighboring gene uncharacterized LOC100858426 Neighboring gene bromodomain containing 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sarcosine dehydrogenase, mitochondrial
XP_015135273.4
XP_040542043.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7632458..7655380 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015279787.4 → XP_015135273.4  sarcosine dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8V1AFU8
    Related
    ENSGALP00010042976.1, ENSGALT00010069850.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7044048..7063527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040686109.2 → XP_040542043.1  sarcosine dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8V1ALX0
    Conserved Domains (2) summary
    COG0404
    Location:474 → 911
    GcvT; Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism]
    COG0665
    Location:73 → 441
    DadA; Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]
Nucleotide Protein Strain
Heading Accession and Version

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