U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

C9ORF58 allograft inflammatory factor 1-like [ Gallus gallus (chicken) ]

Gene ID: 417179, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
C9ORF58provided by CGNC
Official Full Name
allograft inflammatory factor 1-likeprovided by CGNC
Primary source
CGNC:2811
See related
Ensembl:ENSGALG00010027654
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
AIF1L
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See C9ORF58 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (6685196..6697264)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (6096518..6108573)

Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene ficolin 3 Neighboring gene laminin subunit gamma 3 Neighboring gene nucleoporin 214 Neighboring gene family with sequence similarity 78 member A

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Functional Identification of Allograft Inflammatory Factor 1-Like Gene in Luning Chicken. Zhao YY, et al. Anim Biotechnol, 2018 Jul 3. PMID 29035136
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ruffle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ruffle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
allograft inflammatory factor 1-like
Names
allograft inflammatory factor 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    6685196..6697264
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_415461.8 → XP_415461.1  allograft inflammatory factor 1-like

    UniProtKB/TrEMBL
    A0A1D5PYG7, A0A8V1A9V6, X2J6L4
    Related
    ENSGALP00010040986.1, ENSGALT00010067028.1
    Conserved Domains (1) summary
    PTZ00184
    Location:41 → 110
    PTZ00184; calmodulin; Provisional

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6096518..6108573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040685985.2 → XP_040541919.1  allograft inflammatory factor 1-like

    UniProtKB/TrEMBL
    A0A1D5PYG7, A0A8V1A9V6, X2J6L4
    Conserved Domains (1) summary
    PTZ00184
    Location:41 → 110
    PTZ00184; calmodulin; Provisional
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.