U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NDEL1 nudE neurodevelopment protein 1 like 1 [ Gallus gallus (chicken) ]

Gene ID: 417317, updated on 3-Dec-2024

Summary

Go to the top of the page Help
Symbol
NDEL1provided by CGNC
Full Name
nudE neurodevelopment protein 1 like 1provided by CGNC
Primary source
CGNC:787
See related
Ensembl:ENSGALG00010029340
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See NDEL1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (2321490..2344414)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (1890945..1913867)

Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054730 Neighboring gene ring finger protein 222 Neighboring gene myosin, heavy chain 10, non-muscle Neighboring gene coiled-coil domain containing 42

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in centrosome localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chromosome segregation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of chromosome localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of mitotic spindle orientation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic centrosome separation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle transport along microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of kinesin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
nuclear distribution protein nudE-like 1
Names
nudE nuclear distribution E homolog (A. nidulans)-like 1
nudE nuclear distribution gene E homolog like 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030696.2 → NP_001025867.1  nuclear distribution protein nudE-like 1

    See identical proteins and their annotated locations for NP_001025867.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000315
    UniProtKB/Swiss-Prot
    Q5ZKH4
    UniProtKB/TrEMBL
    A0A8V1ACD0
    Related
    ENSGALP00010043654.1, ENSGALT00010070963.1
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 193
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam04880
    Location:135 → 309
    NUDE_C; NUDE protein, C-terminal conserved region

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    2321490..2344414
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040649474.2 → XP_040505408.1  nuclear distribution protein nudE-like 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PRW9
    Related
    ENSGALP00010043652.1, ENSGALT00010070961.1
    Conserved Domains (2) summary
    TIGR02168
    Location:32 → 198
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam04880
    Location:140 → 314
    NUDE_C; NUDE protein, C-terminal conserved region

  2. XM_046902002.1 → XP_046757958.1  nuclear distribution protein nudE-like 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PRW9

  3. XM_025141579.3 → XP_024997347.1  nuclear distribution protein nudE-like 1 isoform X4

    UniProtKB/TrEMBL
    A0A1D5PRW9
    Conserved Domains (2) summary
    pfam04880
    Location:140 → 314
    NUDE_C; NUDE protein, C-terminal conserved region
    cl25732
    Location:32 → 198
    SMC_N; RecF/RecN/SMC N terminal domain

  4. XM_025141580.3 → XP_024997348.1  nuclear distribution protein nudE-like 1 isoform X6

    UniProtKB/TrEMBL
    A0A8V1ACD0
    Conserved Domains (2) summary
    pfam04880
    Location:140 → 314
    NUDE_C; NUDE protein, C-terminal conserved region
    cl25732
    Location:32 → 198
    SMC_N; RecF/RecN/SMC N terminal domain

  5. XM_046902003.1 → XP_046757959.1  nuclear distribution protein nudE-like 1 isoform X2

    UniProtKB/TrEMBL
    A0A452J851, A0A8V1ACD0
    Related
    ENSGALP00010043651.1, ENSGALT00010070960.1

  6. XM_046902004.1 → XP_046757960.1  nuclear distribution protein nudE-like 1 isoform X3

    UniProtKB/Swiss-Prot
    Q5ZKH4
    UniProtKB/TrEMBL
    A0A8V1ACD0

  7. XM_040649477.2 → XP_040505411.1  nuclear distribution protein nudE-like 1 isoform X3

    UniProtKB/Swiss-Prot
    Q5ZKH4
    UniProtKB/TrEMBL
    A0A8V1ACD0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 193
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam04880
    Location:135 → 309
    NUDE_C; NUDE protein, C-terminal conserved region

  8. XM_025141578.3 → XP_024997346.1  nuclear distribution protein nudE-like 1 isoform X3

    UniProtKB/Swiss-Prot
    Q5ZKH4
    UniProtKB/TrEMBL
    A0A8V1ACD0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 193
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam04880
    Location:135 → 309
    NUDE_C; NUDE protein, C-terminal conserved region

  9. XM_040649480.2 → XP_040505414.1  nuclear distribution protein nudE-like 1 isoform X5

    UniProtKB/TrEMBL
    A0A1D5PRW9, A0A8V1AJN3
    Related
    ENSGALP00010043653.1, ENSGALT00010070962.1
    Conserved Domains (1) summary
    TIGR02168
    Location:27 → 193
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  10. XM_040649479.2 → XP_040505413.1  nuclear distribution protein nudE-like 1 isoform X3

    UniProtKB/Swiss-Prot
    Q5ZKH4
    UniProtKB/TrEMBL
    A0A8V1ACD0
    Conserved Domains (2) summary
    TIGR02168
    Location:27 → 193
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam04880
    Location:135 → 309
    NUDE_C; NUDE protein, C-terminal conserved region

RNA

  1. XR_006931709.1 RNA Sequence

  2. XR_006931710.1 RNA Sequence

  3. XR_005840596.2 RNA Sequence

  4. XR_005840594.2 RNA Sequence

  5. XR_005840597.2 RNA Sequence

  6. XR_006931711.1 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1890945..1913867
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046929307.1 → XP_046785263.1  nuclear distribution protein nudE-like 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PRW9

  2. XM_046929305.1 → XP_046785261.1  nuclear distribution protein nudE-like 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PRW9

  3. XM_046929313.1 → XP_046785269.1  nuclear distribution protein nudE-like 1 isoform X4

    UniProtKB/TrEMBL
    A0A1D5PRW9

  4. XM_046929316.1 → XP_046785272.1  nuclear distribution protein nudE-like 1 isoform X6

    UniProtKB/TrEMBL
    A0A8V1ACD0

  5. XM_046929308.1 → XP_046785264.1  nuclear distribution protein nudE-like 1 isoform X2

    UniProtKB/TrEMBL
    A0A452J851, A0A8V1ACD0

  6. XM_046929311.1 → XP_046785267.1  nuclear distribution protein nudE-like 1 isoform X3

    UniProtKB/Swiss-Prot
    Q5ZKH4
    UniProtKB/TrEMBL
    A0A8V1ACD0

  7. XM_046929309.1 → XP_046785265.1  nuclear distribution protein nudE-like 1 isoform X3

    UniProtKB/Swiss-Prot
    Q5ZKH4
    UniProtKB/TrEMBL
    A0A8V1ACD0

  8. XM_046929310.1 → XP_046785266.1  nuclear distribution protein nudE-like 1 isoform X3

    UniProtKB/Swiss-Prot
    Q5ZKH4
    UniProtKB/TrEMBL
    A0A8V1ACD0

  9. XM_046929315.1 → XP_046785271.1  nuclear distribution protein nudE-like 1 isoform X5

    UniProtKB/TrEMBL
    A0A1D5PRW9, A0A8V1AJN3

  10. XM_046929312.1 → XP_046785268.1  nuclear distribution protein nudE-like 1 isoform X3

    UniProtKB/Swiss-Prot
    Q5ZKH4
    UniProtKB/TrEMBL
    A0A8V1ACD0

RNA

  1. XR_006936500.1 RNA Sequence

  2. XR_006936505.1 RNA Sequence

  3. XR_006936503.1 RNA Sequence

  4. XR_006936504.1 RNA Sequence

  5. XR_006936502.1 RNA Sequence

  6. XR_006936501.1 RNA Sequence

  7. XR_006936506.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZKH4.1 GenPept UniProtKB/Swiss-Prot:Q5ZKH4

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.