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SUMF2 sulfatase modifying factor 2 [ Gallus gallus (chicken) ]

Gene ID: 417542, updated on 17-Aug-2024

Summary

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Official Symbol
SUMF2provided by CGNC
Official Full Name
sulfatase modifying factor 2provided by CGNC
Primary source
CGNC:1763
See related
Ensembl:ENSGALG00010029653
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See SUMF2 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (5380555..5384197)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (5116715..5126652)

Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA22 Neighboring gene chaperonin containing TCP1 subunit 6A Neighboring gene small nucleolar RNA SNORA15 Neighboring gene phosphorylase kinase catalytic subunit gamma 1 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfatase-modifying factor 2; inactive C-alpha-formylglycine-generating enzyme 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5380555..5384197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_415788.8 → XP_415788.2  inactive C-alpha-formylglycine-generating enzyme 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AJR1, A0A8V1APM4
    Related
    ENSGALP00010044382.1, ENSGALT00010071692.1
    Conserved Domains (1) summary
    COG1262
    Location:25 → 298
    YfmG; Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones]

  2. XM_040650387.2 → XP_040506321.1  inactive C-alpha-formylglycine-generating enzyme 2 isoform X2

    Conserved Domains (1) summary
    COG1262
    Location:25 → 173
    YfmG; Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5116715..5126652
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040687171.2 → XP_040543105.1  inactive C-alpha-formylglycine-generating enzyme 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AJR1
    Conserved Domains (1) summary
    COG1262
    Location:25 → 298
    YfmG; Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones]

RNA

  1. XR_006936648.1 RNA Sequence

  2. XR_006936649.1 RNA Sequence

  3. XR_006936650.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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