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TRABD TraB domain containing [ Gallus gallus (chicken) ]

Gene ID: 417746, updated on 3-Dec-2024

Summary

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Official Symbol
TRABDprovided by CGNC
Official Full Name
TraB domain containingprovided by CGNC
Primary source
CGNC:6609
See related
Ensembl:ENSGALG00010001540
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See TRABD in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (20399144..20442355)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (20634009..20674586)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene Mov10 RISC complex RNA helicase like 1 Neighboring gene uncharacterized LOC107049700 Neighboring gene pannexin 2 Neighboring gene tetraspanin-7-like Neighboring gene uncharacterized LOC124417103 Neighboring gene selenoprotein O

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
traB domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030732.3 → NP_001025903.2  traB domain-containing protein

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/TrEMBL
    Q5F403
    Related
    ENSGALP00010001986.1, ENSGALT00010003548.1
    Conserved Domains (1) summary
    cd14726
    Location:72 → 270
    TraB_PrgY-like; TraB/PryY confer plasmid-borne pheromone resistance

  2. NM_001389253.2 → NP_001376182.1  traB domain-containing protein

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/TrEMBL
    Q5F403
    Conserved Domains (1) summary
    cd14726
    Location:72 → 270
    TraB_PrgY-like; TraB/PryY confer plasmid-borne pheromone resistance

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    20399144..20442355
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046934606.1 → XP_046790562.1  traB domain-containing protein isoform X2

    UniProtKB/TrEMBL
    Q5F403

  2. XM_046934797.1 → XP_046790753.1  traB domain-containing protein isoform X4

    UniProtKB/TrEMBL
    A0A8V0X5Y7

  3. XM_046934586.1 → XP_046790542.1  traB domain-containing protein isoform X1

    UniProtKB/TrEMBL
    A0A1D5NX84, A0A8V0X5Y7
    Related
    ENSGALP00010001984.1, ENSGALT00010003546.1

  4. XM_015274569.3 → XP_015130055.1  traB domain-containing protein isoform X4

    UniProtKB/TrEMBL
    A0A8V0X5Y7
    Conserved Domains (1) summary
    cl12050
    Location:25 → 216
    TraB; TraB family

  5. XM_046934660.1 → XP_046790616.1  traB domain-containing protein isoform X3

    UniProtKB/TrEMBL
    Q5F403

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    20634009..20674586
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046907139.1 → XP_046763095.1  traB domain-containing protein isoform X2

    UniProtKB/TrEMBL
    Q5F403

  2. XM_046907142.1 → XP_046763098.1  traB domain-containing protein isoform X4

    UniProtKB/TrEMBL
    A0A8V0X5Y7

  3. XM_046907138.1 → XP_046763094.1  traB domain-containing protein isoform X1

    UniProtKB/TrEMBL
    A0A1D5NX84, A0A8V0X5Y7

  4. XM_046907141.1 → XP_046763097.1  traB domain-containing protein isoform X4

    UniProtKB/TrEMBL
    A0A8V0X5Y7

  5. XM_046907140.1 → XP_046763096.1  traB domain-containing protein isoform X3

    UniProtKB/TrEMBL
    Q5F403
Nucleotide Protein Strain
Heading Accession and Version

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