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MGAT3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase [ Gallus gallus (chicken) ]

Gene ID: 418013, updated on 3-Dec-2024

Summary

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Official Symbol
MGAT3provided by CGNC
Official Full Name
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferaseprovided by CGNC
Primary source
CGNC:9215
See related
Ensembl:ENSGALG00010012517
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See MGAT3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (50667758..50692380, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (50965260..50989882, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053686 Neighboring gene mitochondrial elongation factor 1 Neighboring gene MIEF1 upstream open reading frame protein-like Neighboring gene TGF-beta activated kinase 1 (MAP3K7) binding protein 1 Neighboring gene synaptogyrin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase
Names
mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
NP_001383197.1
XP_015140669.1
XP_015140677.1
XP_015140683.1
XP_025004354.1
XP_040552548.1
XP_046763411.1
XP_046763412.1
XP_046763413.1
XP_046763414.1
XP_046763415.1
XP_046763416.1
XP_046763417.1
XP_046763418.1
XP_046794850.1
XP_046794852.1
XP_046794854.1
XP_046794872.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001396268.1 → NP_001383197.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/TrEMBL
    A0A8V0Y9P2, Q5F3W9
    Related
    ENSGALP00010017442.1, ENSGALT00010030008.1
    Conserved Domains (1) summary
    pfam04724
    Location:194 → 491
    Glyco_transf_17; Glycosyltransferase family 17

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    50667758..50692380 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015285191.4 → XP_015140677.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9P2, Q5F3W9
    Related
    ENSGALP00010017450.1, ENSGALT00010030024.1
    Conserved Domains (1) summary
    pfam04724
    Location:194 → 491
    Glyco_transf_17; Glycosyltransferase family 17

  2. XM_046938896.1 → XP_046794852.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X1

    UniProtKB/TrEMBL
    Q5F3W9

  3. XM_046938898.1 → XP_046794854.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X1

    UniProtKB/TrEMBL
    Q5F3W9

  4. XM_015285197.4 → XP_015140683.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9P2, Q5F3W9
    Related
    ENSGALP00010017453.1, ENSGALT00010030031.1
    Conserved Domains (1) summary
    pfam04724
    Location:194 → 491
    Glyco_transf_17; Glycosyltransferase family 17

  5. XM_040696614.2 → XP_040552548.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X1

    UniProtKB/TrEMBL
    Q5F3W9
    Conserved Domains (1) summary
    pfam04724
    Location:216 → 513
    Glyco_transf_17; Glycosyltransferase family 17

  6. XM_025148586.3 → XP_025004354.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9P2, Q5F3W9
    Related
    ENSGALP00010017432.1, ENSGALT00010029991.1
    Conserved Domains (1) summary
    pfam04724
    Location:194 → 491
    Glyco_transf_17; Glycosyltransferase family 17

  7. XM_046938916.1 → XP_046794872.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9P2, Q5F3W9
    Related
    ENSGALP00010017440.1, ENSGALT00010030004.1

  8. XM_046938894.1 → XP_046794850.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X1

    UniProtKB/TrEMBL
    Q5F3W9

  9. XM_015285183.4 → XP_015140669.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9P2, Q5F3W9
    Related
    ENSGALP00010017452.1, ENSGALT00010030029.1
    Conserved Domains (1) summary
    pfam04724
    Location:194 → 491
    Glyco_transf_17; Glycosyltransferase family 17

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    50965260..50989882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046907459.1 → XP_046763415.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9P2, Q5F3W9

  2. XM_046907456.1 → XP_046763412.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X1

    UniProtKB/TrEMBL
    Q5F3W9

  3. XM_046907457.1 → XP_046763413.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X1

    UniProtKB/TrEMBL
    Q5F3W9

  4. XM_046907461.1 → XP_046763417.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9P2, Q5F3W9

  5. XM_046907455.1 → XP_046763411.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X1

    UniProtKB/TrEMBL
    Q5F3W9

  6. XM_046907460.1 → XP_046763416.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9P2, Q5F3W9

  7. XM_046907462.1 → XP_046763418.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9P2, Q5F3W9

  8. XM_046907458.1 → XP_046763414.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9P2, Q5F3W9

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001012693.1: Suppressed sequence

    Description
    NM_001012693.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein Strain
Heading Accession and Version

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