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CGTL cystine/glutamate transporter-like [ Gallus gallus (chicken) ]

Gene ID: 418109, updated on 17-Aug-2024

Summary

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Symbol
CGTLprovided by CGNC
Full Name
cystine/glutamate transporter-likeprovided by CGNC
Primary source
CGNC:84288
See related
Ensembl:ENSGALG00010013309
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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Genomic context

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See CGTL in Genome Data Viewer
Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (56680624..56709615, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (56981487..57010488, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112533565 Neighboring gene aldo-keto reductase family 1 member D1 Neighboring gene poly [ADP-ribose] polymerase 12-like Neighboring gene lysine demethylase 7A Neighboring gene solute carrier family 37 member 3 Neighboring gene RAB19, member RAS oncogene family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-amino acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cystine/glutamate transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    56680624..56709615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015287480.4 → XP_015142966.2  cystine/glutamate transporter isoform X1

    UniProtKB/TrEMBL
    A0A8V0YDE1, A0A8V0YJ10
    Related
    ENSGALP00010018809.1, ENSGALT00010032019.1
    Conserved Domains (1) summary
    TIGR00911
    Location:9 → 470
    2A0308; L-type amino acid transporter

  2. XM_040658837.2 → XP_040514771.1  cystine/glutamate transporter isoform X2

    Conserved Domains (1) summary
    TIGR00911
    Location:9 → 290
    2A0308; L-type amino acid transporter

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    56981487..57010488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040660851.2 → XP_040516785.1  cystine/glutamate transporter isoform X1

    UniProtKB/TrEMBL
    A0A8V0YDE1, A0A8V0YJ10
    Conserved Domains (1) summary
    TIGR00911
    Location:9 → 470
    2A0308; L-type amino acid transporter

  2. XM_040660856.2 → XP_040516790.1  cystine/glutamate transporter isoform X2

    Conserved Domains (1) summary
    TIGR00911
    Location:9 → 290
    2A0308; L-type amino acid transporter
Nucleotide Protein
Heading Accession and Version

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