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ATXN10 ataxin 10 [ Gallus gallus (chicken) ]

Gene ID: 418245, updated on 17-Aug-2024

Summary

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Official Symbol
ATXN10provided by CGNC
Official Full Name
ataxin 10provided by CGNC
Primary source
CGNC:10608
See related
Ensembl:ENSGALG00010012329
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ATXN10 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (70650654..70746582)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (70964006..71060015)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene RIB43A domain with coiled-coils 1 Neighboring gene uncharacterized LOC107053998 Neighboring gene fibulin 1 Neighboring gene uncharacterized LOC121107699 Neighboring gene uncharacterized LOC107053997 Neighboring gene Wnt family member 7B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ataxin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    70650654..70746582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_416469.8 → XP_416469.2  ataxin-10 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PLC3
    Related
    ENSGALP00010017162.1, ENSGALT00010029525.1
    Conserved Domains (1) summary
    pfam09759
    Location:376 → 473
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

  2. XM_004938043.5 → XP_004938100.1  ataxin-10 isoform X2

    UniProtKB/TrEMBL
    E1C7R6
    Related
    ENSGALP00010017159.1, ENSGALT00010029522.1
    Conserved Domains (1) summary
    pfam09759
    Location:349 → 446
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

  3. XM_015291006.4 → XP_015146492.1  ataxin-10 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YDZ5
    Related
    ENSGALP00010017155.1, ENSGALT00010029515.1
    Conserved Domains (1) summary
    pfam09759
    Location:376 → 418
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    70964006..71060015
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040658123.2 → XP_040514057.1  ataxin-10 isoform X1

    UniProtKB/TrEMBL
    A0A1D5PLC3
    Conserved Domains (1) summary
    pfam09759
    Location:376 → 473
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

  2. XM_040658125.2 → XP_040514059.1  ataxin-10 isoform X2

    UniProtKB/TrEMBL
    E1C7R6
    Conserved Domains (1) summary
    pfam09759
    Location:349 → 446
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain

  3. XM_040658126.2 → XP_040514060.1  ataxin-10 isoform X3

    UniProtKB/TrEMBL
    A0A8V0YDZ5
    Conserved Domains (1) summary
    pfam09759
    Location:376 → 418
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain
Nucleotide Protein
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