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ZDHHC23 zinc finger DHHC-type containing 23 [ Gallus gallus (chicken) ]

Gene ID: 418353, updated on 17-Aug-2024

Summary

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Symbol
ZDHHC23provided by CGNC
Full Name
zinc finger DHHC-type containing 23provided by CGNC
Primary source
CGNC:11253
See related
Ensembl:ENSGALG00010006549
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ZDHHC23 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (83050106..83079487, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (83235732..83265167, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene dopamine receptor D3 Neighboring gene queuine tRNA-ribosyltransferase accessory subunit 2 Neighboring gene coiled-coil domain containing 191 Neighboring gene uncharacterized LOC121106604 Neighboring gene GRAM domain containing 1C Neighboring gene Ig lambda chain V-VI region EB4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-cysteine S-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-L-cysteine S-palmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
palmitoyltransferase ZDHHC23
Names
probable palmitoyltransferase ZDHHC23
NP_001012837.2
XP_015150789.3
XP_015150799.3
XP_015150805.3
XP_015150827.3
XP_025005002.2
XP_040553851.1
XP_040553861.1
XP_046763723.1
XP_046763724.1
XP_046763726.1
XP_046763727.1
XP_046763728.1
XP_046763729.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001012819.2 → NP_001012837.2  palmitoyltransferase ZDHHC23

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000017
    UniProtKB/TrEMBL
    Q5F493
    Related
    ENSGALP00010009077.1, ENSGALT00010015588.1
    Conserved Domains (1) summary
    cl19890
    Location:235 → 332
    DHHC; DHHC palmitoyltransferase

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    83050106..83079487 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015295341.4 → XP_015150827.3  palmitoyltransferase ZDHHC23 isoform X5

    Conserved Domains (1) summary
    cl19890
    Location:235 → 327
    DHHC; DHHC palmitoyltransferase

  2. XM_040697917.2 → XP_040553851.1  palmitoyltransferase ZDHHC23 isoform X4

    Conserved Domains (1) summary
    cl19890
    Location:235 → 292
    DHHC; DHHC palmitoyltransferase

  3. XM_015295313.4 → XP_015150799.3  palmitoyltransferase ZDHHC23 isoform X2

    Conserved Domains (1) summary
    cl19890
    Location:235 → 292
    DHHC; DHHC palmitoyltransferase

  4. XM_015295319.4 → XP_015150805.3  palmitoyltransferase ZDHHC23 isoform X3

    Conserved Domains (1) summary
    cl19890
    Location:235 → 298
    DHHC; DHHC palmitoyltransferase

  5. XM_015295303.4 → XP_015150789.3  palmitoyltransferase ZDHHC23 isoform X1

    Conserved Domains (1) summary
    cl19890
    Location:235 → 298
    DHHC; DHHC palmitoyltransferase

  6. XM_025149234.3 → XP_025005002.2  palmitoyltransferase ZDHHC23 isoform X7

    UniProtKB/TrEMBL
    A0A8V0XYJ3, Q5F493
    Related
    ENSGALP00010009075.1, ENSGALT00010015584.1
    Conserved Domains (1) summary
    cl19890
    Location:208 → 305
    DHHC; DHHC palmitoyltransferase

  7. XM_040697927.2 → XP_040553861.1  palmitoyltransferase ZDHHC23 isoform X6

    Conserved Domains (1) summary
    cl19890
    Location:235 → 330
    DHHC; DHHC palmitoyltransferase

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    83235732..83265167 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046907772.1 → XP_046763728.1  palmitoyltransferase ZDHHC23 isoform X5

  2. XM_046907771.1 → XP_046763727.1  palmitoyltransferase ZDHHC23 isoform X4

  3. XM_046907768.1 → XP_046763724.1  palmitoyltransferase ZDHHC23 isoform X2

  4. XM_046907770.1 → XP_046763726.1  palmitoyltransferase ZDHHC23 isoform X3

  5. XM_046907767.1 → XP_046763723.1  palmitoyltransferase ZDHHC23 isoform X1

  6. XM_046907773.1 → XP_046763729.1  palmitoyltransferase ZDHHC23 isoform X6

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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