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CG6236 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41857, updated on 9-Dec-2024

Summary

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Official Symbol
CG6236provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0038318
Locus tag
Dmel_CG6236
See related
AllianceGenome:FB:FBgn0038318
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG6236; gi21357449; gi23171351; gi7299997
Summary
Is expressed in adult head. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG6236 in Genome Data Viewer
Location:
88F1-88F1; 3-57 cM
Exon count:
8
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (15325325..15328269, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (11151047..11153991, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ENL/AF9-related Neighboring gene easter Neighboring gene mitochondrial ribosomal protein L9 Neighboring gene FK506-binding protein 39kD

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new domain family in the superfamily of alkaline phosphatases. Bhadra R, et al. In Silico Biol, 2005. PMID 16268782
  2. Laser microdissection of sensory organ precursor cells of Drosophila microchaetes. Buffin E, et al. PLoS One, 2010 Feb 19. PMID 20174573, Free PMC Article
  3. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
  4. Identification of genes that promote or inhibit olfactory memory formation in Drosophila. Walkinshaw E, et al. Genetics, 2015 Apr. PMID 25644700, Free PMC Article
  5. Seizure control through genetic and pharmacological manipulation of Pumilio in Drosophila: a key component of neuronal homeostasis. Lin WH, et al. Dis Model Mech, 2017 Feb 1. PMID 28067623, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG6236-PA
CG6236-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    15325325..15328269 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_169646.3 → NP_732014.2  uncharacterized protein Dmel_CG6236, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_732014.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95TI3, Q9VF91
    Related
    FBpp0082575
    Conserved Domains (2) summary
    pfam02995
    Location:73 → 581
    DUF229; Protein of unknown function (DUF229)
    cd16021
    Location:201 → 477
    ALP_like; uncharacterized Alkaline phosphatase subfamily

  2. NM_142189.4 → NP_650446.2  uncharacterized protein Dmel_CG6236, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650446.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95TI3, Q9VF91
    Related
    FBpp0082576
    Conserved Domains (2) summary
    pfam02995
    Location:73 → 581
    DUF229; Protein of unknown function (DUF229)
    cd16021
    Location:201 → 477
    ALP_like; uncharacterized Alkaline phosphatase subfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q95TI3 Q95TI3
Q9VF91 Q9VF91

Gene LinkOut

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