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ITGBL1 integrin subunit beta like 1 [ Gallus gallus (chicken) ]

Gene ID: 418769, updated on 17-Aug-2024

Summary

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Symbol
ITGBL1provided by CGNC
Full Name
integrin subunit beta like 1provided by CGNC
Primary source
CGNC:12659
See related
Ensembl:ENSGALG00010005204
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ITGBL1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (143383556..143520613, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (143374636..143511356, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene methyltransferase like 21C Neighboring gene tripeptidyl peptidase 2 Neighboring gene fibroblast growth factor 14 Neighboring gene sodium leak channel, non-selective Neighboring gene uncharacterized LOC124417477

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amyloid-beta binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin beta-like protein 1
Names
integrin, beta-like 1 (with EGF-like repeat domains)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    143383556..143520613 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046900718.1 → XP_046756674.1  integrin beta-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XM37
    Related
    ENSGALP00010006881.1, ENSGALT00010012312.1

  2. XM_416966.7 → XP_416966.4  integrin beta-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XFG9, A0A8V0XPU9
    Related
    ENSGALP00010006877.1, ENSGALT00010012304.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    143374636..143511356 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046909491.1 → XP_046765447.1  integrin beta-like protein 1 isoform X2

  2. XM_040660277.2 → XP_040516211.1  integrin beta-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XFG9
Nucleotide Protein Strain
Heading Accession and Version

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