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NDFIP2 Nedd4 family interacting protein 2 [ Gallus gallus (chicken) ]

Gene ID: 418803, updated on 3-Dec-2024

Summary

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Symbol
NDFIP2provided by CGNC
Full Name
Nedd4 family interacting protein 2provided by CGNC
Primary source
CGNC:12692
See related
Ensembl:ENSGALG00010000717
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See NDFIP2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (152976794..153023796, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (152917272..152964494, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene sprouty RTK signaling antagonist 2 Neighboring gene uncharacterized LOC101750454 Neighboring gene uncharacterized LOC107051901 Neighboring gene uncharacterized LOC124417403 Neighboring gene RNA binding motif protein 26

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables WW domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in metal ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NEDD4 family-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030820.2 → NP_001025991.1  NEDD4 family-interacting protein 2 isoform 3

    See identical proteins and their annotated locations for NP_001025991.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000027
    UniProtKB/TrEMBL
    A0A8V0X635, Q5F3V5
    Related
    ENSGALP00010000842.1, ENSGALT00010001536.1

  2. NM_001397206.1 → NP_001384135.1  NEDD4 family-interacting protein 2 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000027
    UniProtKB/TrEMBL
    A0A8V0X635
    Conserved Domains (1) summary
    cd22306
    Location:7 → 254
    NDFIP2; NEDD4 family-interacting protein 2

  3. NM_001397207.1 → NP_001384136.1  NEDD4 family-interacting protein 2 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000027
    UniProtKB/TrEMBL
    A0A8V0X635
    Conserved Domains (1) summary
    cd22306
    Location:15 → 236
    NDFIP2; NEDD4 family-interacting protein 2

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    152976794..153023796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046941358.1 → XP_046797314.1  NEDD4 family-interacting protein 2 isoform X2

  2. XM_015275343.4 → XP_015130829.1  NEDD4 family-interacting protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X635
    Conserved Domains (1) summary
    PHA03269
    Location:14 → 86
    PHA03269; envelope glycoprotein C; Provisional

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    152917272..152964494 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046908158.1 → XP_046764114.1  NEDD4 family-interacting protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X635

  2. XM_046908159.1 → XP_046764115.1  NEDD4 family-interacting protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8V0X3N1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials