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SLC25A15 solute carrier family 25 member 15 [ Gallus gallus (chicken) ]

Gene ID: 418886, updated on 3-Dec-2024

Summary

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Symbol
SLC25A15provided by CGNC
Full Name
solute carrier family 25 member 15provided by CGNC
Primary source
CGNC:50873
See related
Ensembl:ENSGALG00010002621
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See SLC25A15 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (170389904..170405982, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (170461388..170477493, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene thrombospondin type 1 domain containing 1 Neighboring gene fibrinogen like 1B Neighboring gene transmembrane phosphatase with tensin homology Neighboring gene mitochondrial ribosomal protein S31 Neighboring gene forkhead box O1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial ornithine transporter 1
Names
solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008442.1 → NP_001008442.1  mitochondrial ornithine transporter 1

    See identical proteins and their annotated locations for NP_001008442.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ720668
    UniProtKB/TrEMBL
    A0A8V0X6R7, A0A8V0XHI7, Q5ZIW6
    Related
    ENSGALP00010003788.1, ENSGALT00010006075.1
    Conserved Domains (1) summary
    pfam00153
    Location:205 → 296
    Mito_carr; Mitochondrial carrier protein

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    170389904..170405982 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040699962.2 → XP_040555896.1  mitochondrial ornithine transporter 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X6R7, A0A8V0XHI7, Q5ZIW6
    Related
    ENSGALP00010003787.1, ENSGALT00010006074.1
    Conserved Domains (1) summary
    pfam00153
    Location:205 → 296
    Mito_carr; Mitochondrial carrier protein

  2. XM_015275733.4 → XP_015131219.1  mitochondrial ornithine transporter 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X6R7, A0A8V0XHI7, Q5ZIW6
    Conserved Domains (1) summary
    pfam00153
    Location:205 → 296
    Mito_carr; Mitochondrial carrier protein

  3. XM_015275743.4 → XP_015131229.1  mitochondrial ornithine transporter 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X6R7, A0A8V0XHI7, Q5ZIW6
    Related
    ENSGALP00010003791.1, ENSGALT00010006078.1
    Conserved Domains (1) summary
    pfam00153
    Location:205 → 296
    Mito_carr; Mitochondrial carrier protein

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    170461388..170477493 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046908265.1 → XP_046764221.1  mitochondrial ornithine transporter 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X6R7, A0A8V0XHI7, Q5ZIW6

  2. XM_046908263.1 → XP_046764219.1  mitochondrial ornithine transporter 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X6R7, A0A8V0XHI7, Q5ZIW6

  3. XM_046908264.1 → XP_046764220.1  mitochondrial ornithine transporter 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0X6R7, A0A8V0XHI7, Q5ZIW6
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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