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COG6 component of oligomeric golgi complex 6 [ Gallus gallus (chicken) ]

Gene ID: 418888, updated on 17-Aug-2024

Summary

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Symbol
COG6provided by CGNC
Full Name
component of oligomeric golgi complex 6provided by CGNC
Primary source
CGNC:12795
See related
Ensembl:ENSGALG00010002689
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See COG6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (170777465..170828800, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (170850020..170901344, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101750153 Neighboring gene uncharacterized LOC121109048 Neighboring gene uncharacterized LOC121109049 Neighboring gene lipoma HMGIC fusion partner-like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    170777465..170828800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_417082.8 → XP_417082.2  conserved oligomeric Golgi complex subunit 6

    UniProtKB/TrEMBL
    A0A3Q2UCG9, A0A8V0XE29
    Related
    ENSGALP00010003871.1, ENSGALT00010006242.1
    Conserved Domains (1) summary
    pfam06419
    Location:42 → 638
    COG6; Conserved oligomeric complex COG6

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    170850020..170901344 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040657893.2 → XP_040513827.1  conserved oligomeric Golgi complex subunit 6

    UniProtKB/TrEMBL
    A0A3Q2UCG9, A0A8V0XE29
    Conserved Domains (1) summary
    pfam06419
    Location:42 → 638
    COG6; Conserved oligomeric complex COG6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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