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PGM2L1 phosphoglucomutase 2 like 1 [ Gallus gallus (chicken) ]

Gene ID: 419052, updated on 17-Aug-2024

Summary

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Symbol
PGM2L1provided by CGNC
Full Name
phosphoglucomutase 2 like 1provided by CGNC
Primary source
CGNC:12999
See related
Ensembl:ENSGALG00010001820
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See PGM2L1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (194542295..194581626, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (194410747..194450052, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121109195 Neighboring gene trophoblast glycoprotein-like Neighboring gene uncharacterized LOC107052472 Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 3 Neighboring gene lipoyl(octanoyl) transferase 2 (putative)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucose-1,6-bisphosphate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables intramolecular phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucose 1,6-bisphosphate synthase
XP_001233129.2
XP_040514797.1
XP_040514798.1
XP_040515086.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    194542295..194581626 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001233128.7 → XP_001233129.2  glucose 1,6-bisphosphate synthase isoform X1

    UniProtKB/TrEMBL
    A0A8V0X744, F1NAA5
    Related
    ENSGALP00010002437.1, ENSGALT00010004140.1
    Conserved Domains (1) summary
    PTZ00150
    Location:22 → 621
    PTZ00150; phosphoglucomutase-2-like protein; Provisional

  2. XM_040659152.2 → XP_040515086.1  glucose 1,6-bisphosphate synthase isoform X2

    UniProtKB/TrEMBL
    A0A1D5NUN2, A0A8V0X744
    Related
    ENSGALP00010002441.1, ENSGALT00010004144.1
    Conserved Domains (1) summary
    PTZ00150
    Location:19 → 603
    PTZ00150; phosphoglucomutase-2-like protein; Provisional

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    194410747..194450052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040658863.2 → XP_040514797.1  glucose 1,6-bisphosphate synthase isoform X1

    UniProtKB/TrEMBL
    A0A8V0X744, F1NAA5
    Conserved Domains (1) summary
    PTZ00150
    Location:22 → 621
    PTZ00150; phosphoglucomutase-2-like protein; Provisional

  2. XM_040658864.2 → XP_040514798.1  glucose 1,6-bisphosphate synthase isoform X2

    UniProtKB/TrEMBL
    A0A1D5NUN2, A0A8V0X744
    Conserved Domains (1) summary
    PTZ00150
    Location:19 → 603
    PTZ00150; phosphoglucomutase-2-like protein; Provisional

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001006283.1: Suppressed sequence

    Description
    NM_001006283.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
Nucleotide Protein Strain
Heading Accession and Version

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