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GMEB2 glucocorticoid modulatory element binding protein 2 [ Gallus gallus (chicken) ]

Gene ID: 419264, updated on 17-Aug-2024

Summary

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Symbol
GMEB2provided by CGNC
Full Name
glucocorticoid modulatory element binding protein 2provided by CGNC
Primary source
CGNC:13043
See related
Ensembl:ENSGALG00010016409
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See GMEB2 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 20 NC_052551.1 (10058416..10071612)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 20 NC_052592.1 (9840200..9853394)

Chromosome 20 - NC_052551.1Genomic Context describing neighboring genes Neighboring gene regulator of telomere elongation helicase 1 Neighboring gene microRNA 1798 Neighboring gene stathmin 3 Neighboring gene helicase with zinc finger 2 Neighboring gene C20orf195 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucocorticoid modulatory element-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052551.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    10058416..10071612
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040650970.2 → XP_040506904.1  glucocorticoid modulatory element-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z2I2
    Related
    ENSGALP00010022821.1, ENSGALT00010039538.1
    Conserved Domains (1) summary
    smart00258
    Location:91 → 164
    SAND; SAND domain

  2. XM_015296602.4 → XP_015152088.1  glucocorticoid modulatory element-binding protein 2 isoform X2

    Conserved Domains (1) summary
    pfam01342
    Location:89 → 162
    SAND; SAND domain

  3. XM_040650971.2 → XP_040506905.1  glucocorticoid modulatory element-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z2I2
    Conserved Domains (1) summary
    smart00258
    Location:91 → 164
    SAND; SAND domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052592.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    9840200..9853394
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040688164.2 → XP_040544098.1  glucocorticoid modulatory element-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z2I2
    Conserved Domains (1) summary
    smart00258
    Location:91 → 164
    SAND; SAND domain

  2. XM_040688166.2 → XP_040544100.1  glucocorticoid modulatory element-binding protein 2 isoform X2

    Conserved Domains (1) summary
    pfam01342
    Location:89 → 162
    SAND; SAND domain

  3. XM_040688165.2 → XP_040544099.1  glucocorticoid modulatory element-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z2I2
    Conserved Domains (1) summary
    smart00258
    Location:91 → 164
    SAND; SAND domain
Nucleotide Protein Strain
Heading Accession and Version

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