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TNFRSF9 TNF receptor superfamily member 9 [ Gallus gallus (chicken) ]

Gene ID: 419365, updated on 17-Aug-2024

Summary

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Official Symbol
TNFRSF9provided by CGNC
Official Full Name
TNF receptor superfamily member 9provided by CGNC
Primary source
CGNC:338
See related
Ensembl:ENSGALG00010018758
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See TNFRSF9 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 21 NC_052552.1 (259896..264326)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 21 NC_052593.1 (291546..295979)

Chromosome 21 - NC_052552.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S16 Neighboring gene solute carrier family 45, member 1 Neighboring gene ERBB receptor feedback inhibitor 1 Neighboring gene Parkinsonism associated deglycase Neighboring gene urotensin 2 Neighboring gene period circadian clock 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor receptor superfamily member 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052552.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    259896..264326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015297003.4 → XP_015152489.1  tumor necrosis factor receptor superfamily member 9

    UniProtKB/TrEMBL
    A0A3Q2UM48, A0A8V0ZES6
    Related
    ENSGALP00010027054.1, ENSGALT00010045321.1
    Conserved Domains (2) summary
    cd00185
    Location:48 → 86
    TNFRSF; CRD2 [structural motif]
    cl22855
    Location:28 → 158
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052593.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    291546..295979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040688928.2 → XP_040544862.1  tumor necrosis factor receptor superfamily member 9

    UniProtKB/TrEMBL
    A0A3Q2UM48, A0A8V0ZES6
    Conserved Domains (2) summary
    cd00185
    Location:48 → 86
    TNFRSF; CRD2 [structural motif]
    cl22855
    Location:28 → 158
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
Nucleotide Protein
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